| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1361 |
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| Symbol | |
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| ID | 3102099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1449325 |
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| End bp | 1450488 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637170539 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_113822 |
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| Protein GI | 53804521 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.70378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGCA CCCTTGCCGG CATCCTTACT TCCATGCTGT TCCTGGGCAT CGGCGGCTGC
GATCGACCCA ACACTTACGT CCCGCCGCCA CCGCCGCCCG TCATCATCAG CCAGCCGGTC
GTAGGCCCGG TCACGCCCTA TCTCGAACTC ACCGGAAACA CCCAGGCGAT CAAGACCGTG
GAACTCCGCG CCCGGGTCGA AGGTTATCTG GAAAAAATCC TGTTCCGCGA GGGCGAAATC
GTCAGGGAGG GACAACTGCT GTTCCTCATC CAGCAGAATA CCTACCAGGC CAAGCTGAAG
GAGGCCAAGG CCCAGGTGCT CGCCGACAAG GCCCGCCTGA TGCATGCAGA AACCGAGTTC
GCCCGTTTCT CGGGATTGCT CAAGCAGAAT GCCGCCGCCC AGACCGACGT CGACCGCTGG
CACTACGAAC GGGATTCGGC GCAGGCCGCA GTCATGGCCT CGGAAGCCAA CGTGGAACTG
GCCCAACTCA ATCTGAGCTA CACCGAGGTC AGAGCGCCGT TCACCGGCCG CGCCGGGCGA
CGCCTGAAGG ATCCGGGCAA CCTGGTCGGT GCCGGCGAGA AAACCGTACT CGCCGAAATA
AACCAGATCG ACCCGATCTA CGCCTATTTC ACGATCAGCG AGCATGATCT GCTGCGGGTC
CGGGGCCAGC ATCAGGACGA GGCGACCAAT CCCCACACAC CGGACGTGCC CGTGTTCCTG
GGTCTGGTCA ACGAGGACGG CTATCCGCAC CAGGGCAAAC TCGATTTCGC CGGCATCCGG
CTGGACCCCA CCACAGGCAC CTTGCTGCTG CGCGCCATTT TCCCGAACAC GGACTATTCC
ATTCTTCCCG GCCTGTTCGC CCGGCTCAAG GTGCCGGTCG ACGCGGCGCA GTCCGCCCTG
CTCATCCCGG TGGAAGCCAT CGGCTACGAC CAGCTCGGCC CCTACGTGCT CGTCGTCGAC
GACAAGAACC TGGTCGAGCG GCGCAGCATC ACCACCGGCC CCCCTGCCGG GCGCATGATG
TCGGTCAGCG ACGGTTTGAA GAGCAGCGAC TGGATCGTGG TCGATGGCCT GCTGCGCGCC
ATTCCCGGCA AGGAAGTGAC CCCCGTCCGG CAGCCGCTGG CGGCTGAACC GGCCGGCGAT
TCCGCGGGAG CGCCCGCCCG ATGA
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| Protein sequence | MQRTLAGILT SMLFLGIGGC DRPNTYVPPP PPPVIISQPV VGPVTPYLEL TGNTQAIKTV
ELRARVEGYL EKILFREGEI VREGQLLFLI QQNTYQAKLK EAKAQVLADK ARLMHAETEF
ARFSGLLKQN AAAQTDVDRW HYERDSAQAA VMASEANVEL AQLNLSYTEV RAPFTGRAGR
RLKDPGNLVG AGEKTVLAEI NQIDPIYAYF TISEHDLLRV RGQHQDEATN PHTPDVPVFL
GLVNEDGYPH QGKLDFAGIR LDPTTGTLLL RAIFPNTDYS ILPGLFARLK VPVDAAQSAL
LIPVEAIGYD QLGPYVLVVD DKNLVERRSI TTGPPAGRMM SVSDGLKSSD WIVVDGLLRA
IPGKEVTPVR QPLAAEPAGD SAGAPAR
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