| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1174 |
|---|
| Symbol | |
|---|
| ID | 3103012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 1228559 |
|---|
| End bp | 1229992 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637170355 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_113640 |
|---|
| Protein GI | 53804712 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5338] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.605378 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCC CGGCTCTCTC GTCGTTTGTC GGTGATGCAG GCGAGGGCGG TGGTGCCGGC
AAGGCACCTT CTTCGGGGAC GAAAGCGCTA CTGATACGTA CGGCTTTGCT TGCCTTACGC
CTTTTGGCCG GGTTTTGCGC GCTGTACCCC GCGTCCACCT GGTCCCAGGG TGGGAATGGC
GTCGCCAATC CTTTGGACGG TTCCAGCGGT TATTCGAATT TCAGTCCCGG CAACACCTAC
GATCCCTACA ACCGTACGCC GCAATATGTG AGGATGGATC AGCCGTTGGG CACGGAAGGA
AGACTTGACG ACGAATTCGA CTTCCGTCTC CCGATCGTTG GGCGTATGCG GGTGGAAGGT
TTTTACGACG ACAACGTGCT GAACACCGGC ATTCTCAAGA AGGGCTCGTT CGGGACGTTC
ATCCAGCCCT GGTTCTTCCT CCCGTTTCAC TACCGCAGTC TCACTGCCGG CCTCGGTTAC
TCGTTTCGCG GCAACGTCTA CGAAAACGTT CCGCAAAACA ATTACGTTGA CAATTATGTC
AACGCGTTCA GCGACGTACG CTTCGACCAC AGAAATCGCC TGAGCCTCAA CGGGTCGCTC
AGTTACGCCC ATGATCCGCT CGGTACTCAA TTCGTACAGG GTGACGCGAG CCTGCTGTTG
AAAAATCCAA ATGAATGGCA GAGCCAGAGT TTCGGGGCCT TGTACCGGTA CGGGGCCGAG
GGGGCCAAAG GTCTCCTGGA ATTCCGGTTC GACTATATGA ACAGGTACTA CCAGAATAAC
CCGGAATTCA CGCGGGGGCG TTCTCTCAAT CAATACAACG TCGGCGGGGC GTTCTATTAT
CGGGTCCTGC CCAAGACTTC GCTTTTGTTC GAAATCAACG AGAGCTTCTC GGACTATTTG
AACCCCCTGC CGAACGGTAT CTCGCAGACC AACAACCAGT TGCGGGTGCT CGGCGGCGTG
ACTTGGCGCG CGACGGCAAA GACGACGGGG ATTCTGAAGG CGGGGGTCCT CGTCAAAGAA
TTTGACGAGC CCGCCCAAGG ACTGGGAGCC AATGGCCAGC CCCGGCCTAC GTTCGACGCG
GCTGTCCTGT GGCAGCCGCG TTCCATCGAT ACCGTGCGGG TCGGCGCCGT GATGATCACC
AACGAGTCGA ATTATCTGGG AGGCGCCGTC AACAACCAGA CCTATTCCGT CATGTGGAAT
CACCAGTGGC TTCCCAAGCT CAGCAGCAAC ATTTACGCGA ATGCCATGGA GAATAGCTAC
ACGGGGTCGG ACCGAACGGA CAAAGGGTAC ATGCTGGGCG TCGGCGTTTA TTACCCGCTT
CAGCGCTGGC TGACGAGCGG GCTCCAATAT ACCTATACCG ACCGTTCCTC TACCCTTGAG
CAATATAGTT TTACCCGTAA CCTGGTCATC CTGAACTTGC AGATGAATTT TTAG
|
|---|
| Protein sequence | MDFPALSSFV GDAGEGGGAG KAPSSGTKAL LIRTALLALR LLAGFCALYP ASTWSQGGNG
VANPLDGSSG YSNFSPGNTY DPYNRTPQYV RMDQPLGTEG RLDDEFDFRL PIVGRMRVEG
FYDDNVLNTG ILKKGSFGTF IQPWFFLPFH YRSLTAGLGY SFRGNVYENV PQNNYVDNYV
NAFSDVRFDH RNRLSLNGSL SYAHDPLGTQ FVQGDASLLL KNPNEWQSQS FGALYRYGAE
GAKGLLEFRF DYMNRYYQNN PEFTRGRSLN QYNVGGAFYY RVLPKTSLLF EINESFSDYL
NPLPNGISQT NNQLRVLGGV TWRATAKTTG ILKAGVLVKE FDEPAQGLGA NGQPRPTFDA
AVLWQPRSID TVRVGAVMIT NESNYLGGAV NNQTYSVMWN HQWLPKLSSN IYANAMENSY
TGSDRTDKGY MLGVGVYYPL QRWLTSGLQY TYTDRSSTLE QYSFTRNLVI LNLQMNF
|
|---|
| |