| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1111 |
|---|
| Symbol | |
|---|
| ID | 3103342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 1166486 |
|---|
| End bp | 1167280 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637170296 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_113581 |
|---|
| Protein GI | 53804540 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0105598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGAAAGG TCATGACTAC TGCATACGCG ATGTCTGGAC TGTTGGTGGG GTTCTTGGTC
GGTCTGACCG GCGTCGGCGG CGGCTCACTG ATGACACCGT TGCTGGTGTT CATGTTCGGG
TTCGCCCCCA AAACGGCGGT GGGAACGGAT CTGCTGTTTG CAGCGATCAC CAAAGGCGGC
GGCGTCCTCG TCCATCACCG TTCCCACCGA TCGGTGGAAT GGAAAATCGT GTTGCAACTG
GCGTTGGGCA GCATTCCCGC GGCTTTGGCC GTCGTCTATC TGCTGGAGAC CGTATTCAAG
AAAGACGAGG CAGTGACCGC GATCATCACC ACCACACTGG GCATCGCCCT GATCTTCACC
GGTCTGTCCT TGCTCCTGCG CAAACGGCTG TCGCGGAAAT CAGCGATTCG GCGCCTGACC
CATACCGAGC GTTTCGGACG CTGGCAGGGA GCACTAACGG TGCTGGTCGG CGTCATTCTG
GGGGTGCTGG TCACCCTCTC CTCGGTCGGC GCCGGTGCCC TGGGCACCGT CGCACTGCTG
TTCCTGTACC CGCGCCTGGC GACGGTGCGC GTCGTGGGAA CCGACCTGGC GCACGCGATC
CCGCTGACCG CCGTCGCCGG CTTGGGCCAC CTGCACATGG GCAATGTGGA TTTCACCCTC
CTCGGCAGCC TCCTGCTGGG CTCGCTCCCC GGCATCTACC TGGGCAGCCA GCTGAGTGCC
AAGATTCCGG AATGGCTGCT GCGCCCCGCG CTCGCCTCGC TCCTCCTGCT GATCGGCTGC
AAGTTCGTGC TCTGA
|
|---|
| Protein sequence | MGKVMTTAYA MSGLLVGFLV GLTGVGGGSL MTPLLVFMFG FAPKTAVGTD LLFAAITKGG
GVLVHHRSHR SVEWKIVLQL ALGSIPAALA VVYLLETVFK KDEAVTAIIT TTLGIALIFT
GLSLLLRKRL SRKSAIRRLT HTERFGRWQG ALTVLVGVIL GVLVTLSSVG AGALGTVALL
FLYPRLATVR VVGTDLAHAI PLTAVAGLGH LHMGNVDFTL LGSLLLGSLP GIYLGSQLSA
KIPEWLLRPA LASLLLLIGC KFVL
|
|---|
| |