Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0920 |
Symbol | |
ID | 3104310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 964187 |
End bp | 964999 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637170111 |
Product | polysaccharide deacetylase family protein |
Protein accession | YP_113403 |
Protein GI | 53804763 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCAG GGCAGGGCGG GCGCTGGACG CCCTCCGTCG GCATCAAGGC GTCCGTGGGT CTCCATGCGG CCGCGGCGGG GCTGGCTCTA TGGCGACCCG AGGACTGGCC CTGGGCGCTG GGGGCGGTCG CCGTAAACCA CATCCTGTTG ACGGCGGCGG GGCTGTGGCC GCACAGCCGC GTGCTCGGCC CGATCATCAC GCGCTTGCCG GAGGAGGCCG CGGCGCGCGG CCAGGTGGCA ATCACCCTCG ATGACGGGCC CGATCCGGAG GTGACGCCGC AGGTGCTGGC GATCCTGGAA GCCTACGGCG CGAAAGCCAC GTTTTTCTGC ATCGGCCGCA AGGTCAGGGA ACACGCCGTG CTTTGCGCGG AGATCGCGGC CCGGGGCCAT GCATTGGAGA ACCACAGCTA TAGTCACAGC CATACGTTTT CGTTGTGCGG GCAGCGCGGC TTCGAGCGCG AACTGCGTCT GGCACAGGAG GCGCTCACCG CGGCTTCCGG GACACCGCCC CGGTTTTTCC GGGCGCCCGC GGGATTGCGC AACCCCTTGC TCGATCCCGT CCTGGCCCGG CTGGACCTTT CCCTGGTCAG TTGGACCCGC CGCGGTTTCG ACACCCGCCG CCGCCGGCCG CAAAGCGTGC TGGCTTCACT GACCCGGCAA CTGCGGGCCG GAGACATCCT GCTGTTGCAT GACGGCAACG CCGCGCGCAC CGACGGCGGT TGCGCCGTCA TTCTGGAAGT GCTGCCGCCG CTCCTGGACG CCATCCGGGA GCGCCGGCTC GAACCCGTGA CCCTGCGCAC CGCCTGCCCA TGA
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Protein sequence | MKSGQGGRWT PSVGIKASVG LHAAAAGLAL WRPEDWPWAL GAVAVNHILL TAAGLWPHSR VLGPIITRLP EEAAARGQVA ITLDDGPDPE VTPQVLAILE AYGAKATFFC IGRKVREHAV LCAEIAARGH ALENHSYSHS HTFSLCGQRG FERELRLAQE ALTAASGTPP RFFRAPAGLR NPLLDPVLAR LDLSLVSWTR RGFDTRRRRP QSVLASLTRQ LRAGDILLLH DGNAARTDGG CAVILEVLPP LLDAIRERRL EPVTLRTACP
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