Gene MCA0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0920 
Symbol 
ID3104310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp964187 
End bp964999 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content70% 
IMG OID637170111 
Productpolysaccharide deacetylase family protein 
Protein accessionYP_113403 
Protein GI53804763 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCAG GGCAGGGCGG GCGCTGGACG CCCTCCGTCG GCATCAAGGC GTCCGTGGGT 
CTCCATGCGG CCGCGGCGGG GCTGGCTCTA TGGCGACCCG AGGACTGGCC CTGGGCGCTG
GGGGCGGTCG CCGTAAACCA CATCCTGTTG ACGGCGGCGG GGCTGTGGCC GCACAGCCGC
GTGCTCGGCC CGATCATCAC GCGCTTGCCG GAGGAGGCCG CGGCGCGCGG CCAGGTGGCA
ATCACCCTCG ATGACGGGCC CGATCCGGAG GTGACGCCGC AGGTGCTGGC GATCCTGGAA
GCCTACGGCG CGAAAGCCAC GTTTTTCTGC ATCGGCCGCA AGGTCAGGGA ACACGCCGTG
CTTTGCGCGG AGATCGCGGC CCGGGGCCAT GCATTGGAGA ACCACAGCTA TAGTCACAGC
CATACGTTTT CGTTGTGCGG GCAGCGCGGC TTCGAGCGCG AACTGCGTCT GGCACAGGAG
GCGCTCACCG CGGCTTCCGG GACACCGCCC CGGTTTTTCC GGGCGCCCGC GGGATTGCGC
AACCCCTTGC TCGATCCCGT CCTGGCCCGG CTGGACCTTT CCCTGGTCAG TTGGACCCGC
CGCGGTTTCG ACACCCGCCG CCGCCGGCCG CAAAGCGTGC TGGCTTCACT GACCCGGCAA
CTGCGGGCCG GAGACATCCT GCTGTTGCAT GACGGCAACG CCGCGCGCAC CGACGGCGGT
TGCGCCGTCA TTCTGGAAGT GCTGCCGCCG CTCCTGGACG CCATCCGGGA GCGCCGGCTC
GAACCCGTGA CCCTGCGCAC CGCCTGCCCA TGA
 
Protein sequence
MKSGQGGRWT PSVGIKASVG LHAAAAGLAL WRPEDWPWAL GAVAVNHILL TAAGLWPHSR 
VLGPIITRLP EEAAARGQVA ITLDDGPDPE VTPQVLAILE AYGAKATFFC IGRKVREHAV
LCAEIAARGH ALENHSYSHS HTFSLCGQRG FERELRLAQE ALTAASGTPP RFFRAPAGLR
NPLLDPVLAR LDLSLVSWTR RGFDTRRRRP QSVLASLTRQ LRAGDILLLH DGNAARTDGG
CAVILEVLPP LLDAIRERRL EPVTLRTACP