Gene MCA0656 details

Gene Information

• Locus tag: MCA0656
• ID: 3102496
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 689629
• End bp: 690297
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637169867
• Product: CRISPR-associated Csd1 family protein
• Protein accession: YP_113169
• Protein GI: 53804975
• TIGRFAM ID: [TIGR01876] CRISPR-associated protein Cas5, Dvulg subtype; [TIGR02593] CRISPR-associated protein Cas5, N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAGACA TCTGTCTCAA AGTTTTTGGC GACTACGCCT GTTTCACCCG CCCCGAGATG 
AAAGTGGAGC GGGTGTCCTA CGACATCATC ACGCCTTCCG CCGCCAGGGC CATTTTCGAG 
GCGATCCTGT GGAAACCGGC CATCCGCTGG CGGGTGACCA AGATCGAAGT CCTAAAGCCC 
ATCCGTTGGA TTTCGGTGCG CCGCAACGAA GTGGGTGCGG TGGCCTCGGT GCGCACCGCC 
CAGACCGCCA TGCAGGCGGG TCGGGGCGAT TTGGGGCTTT ACATCGAAGA AGAACGCCAG 
CAGCGCGCCG GGCTGTTCCT GCGTGAAGTG GCCTACCGGC TCCATGCCCG CTGCGAGCCG 
ACCGACCGGA AAGGCGAGCA GGAGTCGCCC GACAAATTCC TCGCCATGTT CCATCGCCGT 
GCCACGAATG GCCAGTGCTT CAACCAGCCC TATCTCGGCT GCCGGGAATT CGCCGCTCAT 
TTCGAGCCGG TCACGAATCT CGATGCGGCC ATGGCAGACG AACCCCCCAT CACCGAGACC 
CGCGATCTCG GCTGGATGCT GCACGACATC GACTTTGCCA ACGGCATACA GCCCAAGTTC 
TTCCGGGCGC ACATGCAACA GGGTGTCATC CGCGTGCCGG AGTGGAATTC GGAAGGAGTG 
AAGGGATGA 

 

Protein sequence

MKDICLKVFG DYACFTRPEM KVERVSYDII TPSAARAIFE AILWKPAIRW RVTKIEVLKP 
IRWISVRRNE VGAVASVRTA QTAMQAGRGD LGLYIEEERQ QRAGLFLREV AYRLHARCEP 
TDRKGEQESP DKFLAMFHRR ATNGQCFNQP YLGCREFAAH FEPVTNLDAA MADEPPITET 
RDLGWMLHDI DFANGIQPKF FRAHMQQGVI RVPEWNSEGV KG