| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0553 |
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| Symbol | |
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| ID | 3103098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 579565 |
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| End bp | 582750 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637169768 |
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| Product | discoidin domain-containing protein |
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| Protein accession | YP_113072 |
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| Protein GI | 53805205 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.326441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAG CATTTCGCAG TCCCGCCTGG TCCTGGGGAC TGGTGTTGTG GTGGGGTTTG
GCCGCGGGTG GCGGGACCGA GGTGCTGGAC GATTTCGAGA CCCTGTCCGG CTGGACGGCG
GAAGGTTCGC CCGGCACGCG CTTCGAACTG AAGCAGGACG GTGGGTTCGA GGGCAGGGGG
CTCAGGCTGG ACTTCGAATT CGCCGGCGGT GCCGGTTACG TCATCCTGCG CAAGCATTTC
GAGCTTCCCT TGCCGGAAAA CTACGCGTTC AGTTTCCGCG CCAAGGGCGC GGGGCCGGCC
AACACCCTGG AGTTCAAGCT GCTGGACCCG GGCGCGCAGA ACGTCTGGTG GCACCGGCGC
GAGGCCAAGG GGTTGCCCGC AGGCTGGCAG CTCCAGGCGA TCCGCAAGTC CGCCATCGAC
TTCGCCTGGG GGCCTTCGGG CGGTGCGCCG TTGCTGGCGC TGGGCGGCAT CGAGTTCGCG
CTGACCGCGG CGGCCGGCGG CAAGGGTACG CTGTGGCTGG ACGATCTCCG CTTCGAGCGG
CGCGATGCGG TGGTGGACTA CCGGGGGCAA CCCAAGGTGT CGGCATCCTC CGCCAGCGGC
GAGGACGGCG CGGAGAATGC GCTGGATGGG CAGACGCAGA CCGTCTGGCG TAGCGCATCC
AGACCTGCGC GCCAGTGGCT CCGGCTCGAT TTCGGCCAGC GCCGCGAATA CGGCGGGCTT
GTCCTCGCCT GGGAGGGGGA GTGCCACGCG CGGGACTATG CCGTGGAGGT TTCGGACGAC
GGCCGGCGTT GGCGCGGCGT CTACCGGGTG GCGGATGGCA ACGGCCGGCG CGACTACCTG
CCGCTGCCGG AGATCGAATC GCGCTACCTC CGGTTGGAAC TGCGCAAGAG CGCCTGCGGC
AAGGGCTACG CGCTCCGCGA GCTGACGGTG AAGCCGCCCG ATTTCGCCGC TTCCCCCAAC
CGCTTGTTCG AGCACATCGC CCGCAATGAG GCGCGCGGCG CTTATCCGCG CTATTTCCGA
GGCGAGCAGA CGTACTGGAC GCTGGTTGGC GCCAACGGCG GCCACCGCAA GGGGCTCTTG
GGGATGGATG GGGCGCTGGA GACGGAACGC GGCGGCTTCA CGGTGGAGCC GTTCCTGTAT
GCGGACGGCC GCTTGCTGGG CTGGAACGAG GGGCGGCTCT CGCAATCGCT GGAACAGGGG
GATCTGCCTC TGCCGACCGT GGAACGCGAC TACGGGGACC TGAGCCTGGA GGTGACGGGG
TTCGCCGGTA AGCTCGGCGA CGCTCCGCTG TCGCTCGCCC GCTACCGGGT GGCAAACCGC
GCCGTGACGG CGCGCCGGCT CAGGTTGTTC CTGGCCGTAC GTCCGTTCCA GGTCAATCCG
CCCTGGCAGT CGCTCAACAT GAAGGGCGGG GTGAGTCCGA TCCATCGGAT CGAGGCTTCC
GGCCGCGTAC TCGAAGTGGA CGGCGCCGAC GCGCTGGTAG CGATGAATCC GCCCGACGGC
TTCGGCGCCG CCGGTTTCGA CCAGGGCGAC ATCACCGATT TTCTGGGTGA ATCCCGGCTG
CCGCCGCGCA CCGTGGCTTC CGATTCCGCC GGGTATGCAT CGGGAGCCTG GAGGTTCGAT
CTGGAGCTGG GGCCGGCAGC GGCACGGGAG ATCTTCATCG CCGTTCCCGA GCGCAAGAAG
GGTTCGTCCT TGGCCGTCGA AACGGCGCTG AAGGCCGAAG GCGAGACCCT GGGAGCCCGA
TTGTGGCAGG AGGCGGTCGG CTACTGGCGG CAGGCGCTGG CCGGGCCCGA TTTTCTGCTG
CCGGAATCCG AACGGGACCT GGTGCGGAGC CTCCGGGCCA ATCTGGCCTA CATCCTGGTG
AACCGCGACG GTCCGGCCTT GCAGCCGGGT TCCCGTACCT ATGCCCGCAG CTGGATCCGC
GATGGCGCAT TGATGTCCTC GGCCCTGCTC ATGCTGGGAC GCGGCGAGGA AGTGAAGCGC
TTCCTCGAAT GGTACGCGCG GTTCCAGAGC GCGGACGGCG CCATTCCCTG CTGTATCGAC
AGCCGCGGCC CGGACAGTGT GCCGGAGAAC GACAGCCACG GCGAGTTCGT CTACACCGTG
GCCGAGTACT ACCGTCATAC CCGCGACCTC GAGTTCGTGC AGGCGCTGTG GCCCCACATC
GTCGCAGCCA TGGGCCACGT CGACGCGCTG CGGCACCAGC GGATGACCGA GGTCTACCGG
AGCGGCGAGG GCCGGGCCTT CTACGGTCTG ATGCCGGCCT CGATCAGCCA CGAAGGCTAT
GCCTCGCAGC CGGTACATGC GTTCTGGGAC GACTTTTGGA CTCTGCGCGG CATCCGCGAT
GCGGTGATGC TCGCGAAGGT CCTGGGCGAT CACGCCCACG CGGGAAGCTG GAGCCACATG
GCGGCGGAGT TCGGCGGCCA CCTTCATGCC GCGCTGCAAG CCACCATGGC GCGTAAGCAC
ATCGACTACA TCCCGGCCTC GGCCGACCTG GGTGACATCG ACCCCAACGC CGTCGCCATC
ATGGTGTCGA TCGCGGGCGA GGCCGGAAGG TTGCCGCAGG CCGCGCTGGC CAAGACCTTC
GACGATTATC TCGCGCACTT CCGCAAGCGC CGCGACGGCA ACGGCGACGA CGGCCATACG
CCGTACGAGG TGCGCCTCGT CGAGGCTCTG GTGCGGCTGG GGCGGCGTGA CGACGCCTGG
GAGGTCCTGC GTTCCCTGCT GCGCGACCAG CGGCCCCAGG CCTGGCGCCA GTGGGCCGAA
GTGGTGTGGC GCAACCCCGA GGCGCCGCGG TTCATCGGCG ACATGCCGCA TTCCTGGATC
GGCGCGGAAT TCATCCGCTC GCTGCGGAGC TGTTTCGCCT ATGAGGACGA TGCCGAAGAT
TCGCTGGTGC TCGCCGCGGG AATTCCCGCG GAATGGCTAT ACAATGCGGC CAGCGCCGAA
GTCGGGGTCC GCCGCCTGCC TACCGTCCAT GGCCTGCTCG ATTACGGTCT GCGGACTGAA
GGCGCCGAGA CTTTGAAGCT GCACATCGAC GGACGCCTGG CCGTGCCGCC CGGCGGCATC
CGGATACGGC CGCCGGTGGC CAGGCCGATC CAGGCGGCGA AGGTGAACGG CACCGCGGTT
TCCGGTTTCA CGGGCGCCGA GCTGAGGATC GAAGGCGTGC CGGCGGAGGT CGAGATCCGG
TATTGA
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| Protein sequence | MIEAFRSPAW SWGLVLWWGL AAGGGTEVLD DFETLSGWTA EGSPGTRFEL KQDGGFEGRG
LRLDFEFAGG AGYVILRKHF ELPLPENYAF SFRAKGAGPA NTLEFKLLDP GAQNVWWHRR
EAKGLPAGWQ LQAIRKSAID FAWGPSGGAP LLALGGIEFA LTAAAGGKGT LWLDDLRFER
RDAVVDYRGQ PKVSASSASG EDGAENALDG QTQTVWRSAS RPARQWLRLD FGQRREYGGL
VLAWEGECHA RDYAVEVSDD GRRWRGVYRV ADGNGRRDYL PLPEIESRYL RLELRKSACG
KGYALRELTV KPPDFAASPN RLFEHIARNE ARGAYPRYFR GEQTYWTLVG ANGGHRKGLL
GMDGALETER GGFTVEPFLY ADGRLLGWNE GRLSQSLEQG DLPLPTVERD YGDLSLEVTG
FAGKLGDAPL SLARYRVANR AVTARRLRLF LAVRPFQVNP PWQSLNMKGG VSPIHRIEAS
GRVLEVDGAD ALVAMNPPDG FGAAGFDQGD ITDFLGESRL PPRTVASDSA GYASGAWRFD
LELGPAAARE IFIAVPERKK GSSLAVETAL KAEGETLGAR LWQEAVGYWR QALAGPDFLL
PESERDLVRS LRANLAYILV NRDGPALQPG SRTYARSWIR DGALMSSALL MLGRGEEVKR
FLEWYARFQS ADGAIPCCID SRGPDSVPEN DSHGEFVYTV AEYYRHTRDL EFVQALWPHI
VAAMGHVDAL RHQRMTEVYR SGEGRAFYGL MPASISHEGY ASQPVHAFWD DFWTLRGIRD
AVMLAKVLGD HAHAGSWSHM AAEFGGHLHA ALQATMARKH IDYIPASADL GDIDPNAVAI
MVSIAGEAGR LPQAALAKTF DDYLAHFRKR RDGNGDDGHT PYEVRLVEAL VRLGRRDDAW
EVLRSLLRDQ RPQAWRQWAE VVWRNPEAPR FIGDMPHSWI GAEFIRSLRS CFAYEDDAED
SLVLAAGIPA EWLYNAASAE VGVRRLPTVH GLLDYGLRTE GAETLKLHID GRLAVPPGGI
RIRPPVARPI QAAKVNGTAV SGFTGAELRI EGVPAEVEIR Y
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