| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0456 |
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| Symbol | |
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| ID | 3104770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 474069 |
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| End bp | 475463 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637169675 |
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| Product | GGDEF family protein |
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| Protein accession | YP_112986 |
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| Protein GI | 53802330 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.219727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGGCCG ACTGGCTCGC CCGTCCTCGG TTCGTATCCG CATTCTCCAT CGTCGTCTTC
CTCCTGCTCG CGGCATTCGG CGAGTATGTC GTCCGAATCG AGGCGGAGCG GCTGCGGGTG
ATCGCCCAAA ACCAGGTGCT CGCCGAGGCT TCGACGATAC GGGCAAGGCT GGAAGGGGAA
CTGTACTCCA CGCTCTATCT CGCCAACGGC CTGAGCAGCT ACGTATCGGC CCACAAGGCC
CTCGATCCGG CAGCGGTCAA GATCATCCTG AGCACCGTCT TCGGTTACGG GCGGCATTTG
CGCAACATCG TGCTGGCGCC GGACAACGAA GTCCGTTTCA CCTATCCGCT CAAGGGCAAT
GAAAAAGTGA TCGGCTTCCG CTACCAGGAC AACGCCGAGC AATGGCGGGC GGTCAAACGG
GCCATGGAAA CCCGCACCAC CGTGCTCAGC GGCCCGGTGG ACCTGGTCCA GGGCGGGCGC
GGCCTCATCA GCCGAACCCC GGTGTTTCTG CCTGACGGCG AGTACTGGGG AATCGTCGCC
CTGGTGATCA ATATCGACTC GTTGTTCGCC ACGATCAACA AGGACCGCCG TCCCGCCAGG
ATCACCTGGG CCTTGCGCAG CAACGACGAG ACCGGGGAGA AAGGCCGGAT CCTCTTCGGC
GACGCCTGGC TGTTCGACCA TGACCATGTG AATCTGTCGA TCGCCATCCC CGGCGGTTCC
TGGGAACTCG CGGCAACTCC CGCCGAAGGC TGGCGGCCCC CGGGGAAACG CCTGCTCGTC
CTGCGCATCG CCACTCTGGC GCTGTCGGGT CTGATCGCCG CCCTGGTCTT CCTGGTGCTA
TTCGAGCGCA TCCGCATCCA GCATCTGGCC TTGCACGATT CCCTCACCGA CCTGCCCAAC
CGGCGCCTCC TCGACGACCG GCTCGAACGG GCCATCGCCC AGGCCCGGCG CAACCGTGAC
GGTTTTGCCC TACTCTACGT CGATCTCGAC GACTTCAAAC CCATCAACGA CCGTTTCGGT
CATCGGGCCG GCGACCACGT GCTCGTGGAA ATCGCCCGGC GGCTCCGCGG TGCGCTGCGC
CGCGCCGATA CCGTCGCCCG TGTCGGAGGC GATGAATTCA TGCTGATCCT TCCCGGCGCC
CGGGGCCGCC ATGGGGCGAT GACCGTCGTG CAAAAGCTCG CCGGCATCAT CTGCCAACCG
ATCGGCTATA AAGGTCAGTA CCTCAACGTC AGTGCCTCGA TCGGCGTCTC GACCTATCCC
GAGAACGGCG TGACCGCCGA CGCCTTGATC AGCCACGCCG ACGGCTCCAT GTACAGATTC
AAGCAGCATC GGAAATCGCC CACCGACATC AACGGCAATC AGCGATCAGG GGCGGTCTCG
TCCGAAGTTA GCTGA
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| Protein sequence | MPADWLARPR FVSAFSIVVF LLLAAFGEYV VRIEAERLRV IAQNQVLAEA STIRARLEGE
LYSTLYLANG LSSYVSAHKA LDPAAVKIIL STVFGYGRHL RNIVLAPDNE VRFTYPLKGN
EKVIGFRYQD NAEQWRAVKR AMETRTTVLS GPVDLVQGGR GLISRTPVFL PDGEYWGIVA
LVINIDSLFA TINKDRRPAR ITWALRSNDE TGEKGRILFG DAWLFDHDHV NLSIAIPGGS
WELAATPAEG WRPPGKRLLV LRIATLALSG LIAALVFLVL FERIRIQHLA LHDSLTDLPN
RRLLDDRLER AIAQARRNRD GFALLYVDLD DFKPINDRFG HRAGDHVLVE IARRLRGALR
RADTVARVGG DEFMLILPGA RGRHGAMTVV QKLAGIICQP IGYKGQYLNV SASIGVSTYP
ENGVTADALI SHADGSMYRF KQHRKSPTDI NGNQRSGAVS SEVS
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