Gene MCA0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0439 
Symbol 
ID3104806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand+ 
Start bp449378 
End bp450025 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content73% 
IMG OID637169658 
ProductTonB domain-containing protein 
Protein accessionYP_112969 
Protein GI53802325 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.31739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACTTCG TCCGGCTCCC TCCCAGACCC GCCGAGTCCG GGCCGCCACC GTCGCAGACA 
CGGAAGACCG TGACCGAATC GCCCGCCGAG AGCAGTCCGT CGGATGCGCG GCCCGATTCC 
GCGAAGCCGT CCACGCCATC GGCGCCGCGT TTGTCCCGTG CCCCCGTCGT GTCCCGATCG 
AAGCCGGAGC CCCGGATGCC CGGCGTCGCC GCGCCCCGGC TGGACATCCC CGCGCGGGGC 
ACGGGGGTGG AGTTTCCGGC CGTGGCTGGG ACCGATTCGC GGCTGACGGC GCCGCCAGCG 
CAATGGAATC TCCGGAAGAT GCCGGCAGCC CCGGGAGATC TTGCGAGCGG CGCCGAAGGC 
GCAGGGGGCG GCGGCAATCC CCTGATCGTC CTGTTCCGGG TCGTGCCCGA ATACCCGGAG 
GTGGCCCGGC GCCGGGGCAT AGAAGGCTGG GTCCGGCTCG AAGTCCGGGT GACGGCGGCT 
GGCCTCCTCG GCGATGCCCG GGTCGTGGCT GCCAGCCCCC GCGACACGTT CGACGAGGCC 
GCGCTCGAGG CGATCCGGCA CTGGCGTTTC AAGCCGGCGT TCCGGGAAGG CCGGGCCGTG 
GAGCAGCGGG CGATGCTGAC GATGGAGTTC AGGCTCAAGC GGCGTTGA
 
Protein sequence
MDFVRLPPRP AESGPPPSQT RKTVTESPAE SSPSDARPDS AKPSTPSAPR LSRAPVVSRS 
KPEPRMPGVA APRLDIPARG TGVEFPAVAG TDSRLTAPPA QWNLRKMPAA PGDLASGAEG 
AGGGGNPLIV LFRVVPEYPE VARRRGIEGW VRLEVRVTAA GLLGDARVVA ASPRDTFDEA 
ALEAIRHWRF KPAFREGRAV EQRAMLTMEF RLKRR