Gene MCA0401 details

Gene Information

• Locus tag: MCA0401
• ID: 3102750
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 404950
• End bp: 405450
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637169621
• Product: transcription elongation factor, putative
• Protein accession: YP_112932
• Protein GI: 53802404
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCGTG CATTCGTCAA GGAAACCGAC GGTGAAGATC TGGACGACGG TGCGCCGGAT 
CGCCCCGTCA GCCCGCATCC GAACTACGTG ACACCAGCGG GACTGGCCCA GCTCCAGGCC 
AGGGTCGCGG AGCTCACGGC CGAACGGCAG CGTCTGCTGG GCGACGAATC GGTCGGTGCG 
AAACAGCAGC TCCGCCGTGT CGAGCGCGAA CTGCGCTATT ACGACGAGCG GGTCGTCAGC 
GCCATCCCGG TCGATCCCGC GGCTCGGTCC GGAGACCGGG TCCATTTCGG GGCGACGGTC 
GAGGTGGAGG ACGAGGCCGG CAATGTGCAG CGCTATTCCA TCGTCGGTGA AGATGAGGCG 
GACGCGGCCC ACGGTAAGAT CAGCTGGGTG TCACCCTTGG CCAGGGCGCT GCTGAATGCA 
GAGGCGGGCG ATACGGTCAC GTGGAAGAGG CCGGCCGGCG ACAAGGAACT TCATATCCTT 
GCCATCCATC CTTACCGCTA G 

 

Protein sequence

MSRAFVKETD GEDLDDGAPD RPVSPHPNYV TPAGLAQLQA RVAELTAERQ RLLGDESVGA 
KQQLRRVERE LRYYDERVVS AIPVDPAARS GDRVHFGATV EVEDEAGNVQ RYSIVGEDEA 
DAAHGKISWV SPLARALLNA EAGDTVTWKR PAGDKELHIL AIHPYR