| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0342 |
|---|
| Symbol | |
|---|
| ID | 3104004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 342615 |
|---|
| End bp | 344225 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637169562 |
|---|
| Product | MutS family DNA mismatch repair protein |
|---|
| Protein accession | YP_112874 |
|---|
| Protein GI | 53802510 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAATCCA TCGATATCCG GGGCTACCCG ACGATTTTGA AATCCGACGG CAGGGAACCG
CCCAAGATCC CCTCGGTCGC GCCGGGGCGG ACCGGCGCGG CGGTGCTGGA CGAACAGGCA
TTCCGGGTCA TCGAAGTGGA CAAGCTGTTC GAGGCCGCCG ATCATGCCAC CACGGCCATC
GGGCGGGCCG TGCTATACCG CTCCCTCGCG CAGCCGCCGG TCGATGCCGG GCTGATCCGC
GCCAAACAGG AGGCGGTGCG GGAACTGGAA CGGAACGCTG AGCTGCGGAC GGGACTGGAA
GTCCTGCTGG CCGAAGCCGC CAAGCTGGAA GGGGAGTTCT ACAACCTCCT CTACGCCCAG
TTCCTGGGGC TGATCGGTTC ACCTGCGCAT CCCCTGGAAA TCGATGGCTA CGGCTACGCC
ACCTATATCA AGGGCACGCG CTTCATGCTC GAGCTGGTCG AGCGCGCCAA CCGTTTGCCC
GAACCGGACA GCGCCTATCT CAAGGCACTG GTGCGGGAAG TCCGCGATTT CGCCCGCTCA
CGCGCCTACG CCCTGATGAA GGGGCCGGTG TACCGGACCG AGAGGCGGGT CTGCACCCGG
GCCGAAAAGG GGTGGTTCAC ACCGGGCATC CGGTTTCGGC CGTCGCTGTT CAAGCCGGTC
GGCCTTACCG TCACGGTGCT GCTGTTTCTG GCCGCGATGG AGTTTTTGCC GTTCGCGCTG
GACATTGCGG CGTCGATCGC GCCGGTGTTC TGGCTGTTCC TGCTGCCGCT CGGCTTCGTC
TACGTGCCCA TCGTCGGCGG CATGGACCGC GATGGCATCA TCTATCCTCT GCGCGAGGTT
TACCGCCGCT CCGAGGAGGT GCAAGCCACG CTGGATACGC TGGGCCAGCT CGACGAACTG
ATGAGCTTCA TCCGGTTCCG CGAGTCCTTC GGGCATTTCA TGACGCTGCC GGCCATCCTG
GACGGGGAGC GGCACCGGAT GTCGCTGCGC GGGGTGCGCA ATCCGGTGTT GGCCAAGAAC
GATCCGCTCT ATGTGCCCAA TGACATCGAC CTGACCGAGC AGCGGCTGAC TTTCATCACC
GGTCCCAACA GCGGCGGCAA GACCGCGTTC TGCAAGACCC TGGCGCAGGT CCAGATCCTG
GCGCAGGCCG GCTGTTACGT GCCGGCGGAG CGGGCCGAGC TGACCGTCGC CGACCGGGTG
TTCTACCAGG TGCCCGAGAT CAGCCATCTG ACGGATGGTG AAGGCCGCTT CGGTACCGAA
CTCAAGCGGA CCAAGGACAT CTTCCTGGCG TCGACGCCGC GCAGCCTGGT CATCATGGAT
GAGCTGTCGG AAGGGACGAC CAACGAGGAA AAGATGGACA TCTCCGTCGC GATCCTCGAC
GGCTTCCGGG AAAAGGGCAA CACCACGGTT CTCATCACCC ACAACCATGA ACTGGTGGAC
GTCTACCAGG GGAGGCGGAT CGGGCAGGCG CGGCAGGTGG AATTCCGCAA TGAACAGCCG
ACCTACCGCC TGATCGAAGG GGTGTCTCGG GTCAGCCATG CCGACCGCAT CGCCCGGAAG
ATCGGTTTTT CCAGGGAGGA CATCGCCAGA TACCTGCAAG GCAAGCCCTG A
|
|---|
| Protein sequence | MESIDIRGYP TILKSDGREP PKIPSVAPGR TGAAVLDEQA FRVIEVDKLF EAADHATTAI
GRAVLYRSLA QPPVDAGLIR AKQEAVRELE RNAELRTGLE VLLAEAAKLE GEFYNLLYAQ
FLGLIGSPAH PLEIDGYGYA TYIKGTRFML ELVERANRLP EPDSAYLKAL VREVRDFARS
RAYALMKGPV YRTERRVCTR AEKGWFTPGI RFRPSLFKPV GLTVTVLLFL AAMEFLPFAL
DIAASIAPVF WLFLLPLGFV YVPIVGGMDR DGIIYPLREV YRRSEEVQAT LDTLGQLDEL
MSFIRFRESF GHFMTLPAIL DGERHRMSLR GVRNPVLAKN DPLYVPNDID LTEQRLTFIT
GPNSGGKTAF CKTLAQVQIL AQAGCYVPAE RAELTVADRV FYQVPEISHL TDGEGRFGTE
LKRTKDIFLA STPRSLVIMD ELSEGTTNEE KMDISVAILD GFREKGNTTV LITHNHELVD
VYQGRRIGQA RQVEFRNEQP TYRLIEGVSR VSHADRIARK IGFSREDIAR YLQGKP
|
|---|
| |