Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0284 |
Symbol | |
ID | 3104886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 269243 |
End bp | 270799 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637169505 |
Product | outer membrane efflux family protein |
Protein accession | YP_112818 |
Protein GI | 53802442 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.552621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCATCA CCCTGTACGA TTCGGCTCGA GTCCTGCTGC TGCGCCTCGC GCTTGCGGCC GGCTTGGGGC TCCTGCTCGA CGGCTGCAAC AAAATCGGCC CGGACTTCCA CCGGCCAGAA ATCAAACTCA CCGATACCTG GCTGGATGCG CCGAAAAAAG CCGCCAAGGC CGGCGATTTC CGCAACTGGT GGAAACTGTT CAACGATCCG GTGCTGGATC GTCTCATCGA GAAGGCTTAC CGGCAGAATC TGGACGTCCA GAAAGCGGCG ATCCGCATCT ATCAGGCGCG CGCCCAGCTC GGCATCGCCA AAGGCTACCT GTTCCCCCAG AAACAGAACG TGGGAATGGA CACATTCTAT GAACGCATCA GCGAATACTC GCCCTACTAC CAGGGAAGCG ATTTCCACAC GTTCACCTAT TTCCAGACCG GATTCGACGC CATGTGGGAG CTCGACATCT GGGGCCGGTT CCGCCGCGGC ATCGATGCCG CGGGTGCGGA ACTGGCGGCA TCGACCCTGC AATATGACGA CATGGTGGTG ACGCTGACCG CCGAAGTGGC TGCCGCCTAT GTCCAGATAC GCACGTTCAA TCAGCGCCTG GCGCTCGCCA AGGGCAATGC CGACCTGCAA GAACGCAGCT TCCGCGTCGC CGAATCACAG TTCCGCAACG GCCTGAGCAC CGAACTCGAC ATGCAGCAGG CCAAGGCGCT GCACCAGGCG ACCCTGGCCG AGATCGCCAA CCTGGAAGTG GGACTGCGCC AGTCGAAGAA TGCCCTGAGC GTCCTGCTGG GGATGCAGCC CAGCCACCTC GAAAAGGAAC TGGGCCCGGA CAGCGACATC CCCGCCGCCC GGTCGGAGAT CGCCATGGGC ATCCCCACCG ACATCCTGCG CCGCCGCCCC GACGTGCGCG CCCAGGAATA CAAGGCCGCC TCCCAATGCG CCCAGATCGG GATCGCCGAG AGCGAACTCC TCCCCCGCCT TTCCCTGGTC GGCACCGTCG GCTTCAATTC CGGCAGCGTC GACGGACTCG ACGTGGCCAA CGCCATCAGC CCTTCCGGGC TGGCGGGCAA ATTCGGACCG ACCGTCATCT GGCCGATCTT CCAGTACGGA CGACTGACCA ACAACGTCCG GGTCCAGGAC GCCAAGTTCC AGGAACTCCT GACCGACTAC CGCAGCACCG TATTGCGCGC CCTGCGCGAG GTGGAAGACG CGATCATCGC CTTCAAAAAA GCCGAGGAAA GGGTGGCCAG CCTGTCGGAC GGCGTCCGGG CCTCCCAGCG CGCCGCCGAA CTCGCCTTGC GGCAATACCA GAACGGACTC GAGGACTACA CCCGGGTCCT CAATTCGGAA CTGTTCCTGG TGCAGCAGCA AGACCGGCTG ACCGCCAGCC GCGGAGACGT CGCCCGCAGC GTCATCGCCA TGTACAAGGC GCTGGGTGGC GGCTGGGAGA TTCGGGAAGG CCGGGAACTG CTGCCGCCCG GCGTGAAGAA GGAAATGCGC GAGCGTACCG ACTGGAGCGA CCTGCTCGAG GAACCCGTCG GCAAGGGAAT CGACTAG
|
Protein sequence | MRITLYDSAR VLLLRLALAA GLGLLLDGCN KIGPDFHRPE IKLTDTWLDA PKKAAKAGDF RNWWKLFNDP VLDRLIEKAY RQNLDVQKAA IRIYQARAQL GIAKGYLFPQ KQNVGMDTFY ERISEYSPYY QGSDFHTFTY FQTGFDAMWE LDIWGRFRRG IDAAGAELAA STLQYDDMVV TLTAEVAAAY VQIRTFNQRL ALAKGNADLQ ERSFRVAESQ FRNGLSTELD MQQAKALHQA TLAEIANLEV GLRQSKNALS VLLGMQPSHL EKELGPDSDI PAARSEIAMG IPTDILRRRP DVRAQEYKAA SQCAQIGIAE SELLPRLSLV GTVGFNSGSV DGLDVANAIS PSGLAGKFGP TVIWPIFQYG RLTNNVRVQD AKFQELLTDY RSTVLRALRE VEDAIIAFKK AEERVASLSD GVRASQRAAE LALRQYQNGL EDYTRVLNSE LFLVQQQDRL TASRGDVARS VIAMYKALGG GWEIREGREL LPPGVKKEMR ERTDWSDLLE EPVGKGID
|
| |