Gene MCA0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0106 
Symbol 
ID3102068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand+ 
Start bp113538 
End bp114389 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content68% 
IMG OID637169331 
ProductD-amino acid aminotransferase, putative 
Protein accessionYP_112645 
Protein GI53802655 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01121] D-amino acid aminotransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGCC CCCTGGTTTA TCTCAACGGC GAGTTTCTGC CGCTGGATCA GGCCCGCGTG 
TCCGTCCTGG ACCGGGGTTT CTTGTTCGGT GACGGCGTGT ACGAGGTCAT CCCGGTCTAC 
GGCGGGCGGC CGCTGCGGCT GGAAGAGCAC CTCCGGCGGC TGGACGACAG TCTGCGAGGC 
ATCCGCATGA CCTCGCCCCT GATGAGGTCG GAGTGGTCGG AAATCATCGG CCGCCTGATC 
GATGGGGTGG ACGATCAGTC GGTCTATGTG CAGGTGACGC GCGGCGTGGG CCCTGCCCGG 
GACCATTCGA TCCCGGTCGG GGTTCGGCCC ACTGTCTTCG CCATGGCTTC GCCGATCACG 
CCGGTTCCGG TGACCGGCGT GCGCGCGATC ACGCTGGAGG ATATCCGCTG GCGCTGGTGC 
AACATCAAGG CCATCACGCT GTTGCCCAAC GTCCTGCTGC GGCAGCAGGC GGTCGACCGG 
GGCTGCGCCG AGGCCGTGCT GGTGCGCGAG GGCCACGTGA CGGAAGGGAC GGCTAGCAAC 
GTGTTCGCCG TGGTCGGCGG TACCATCGTC ACCCCACCCA AGGGGCCCGA ACTGCTTCCC 
GGCATCACCC GTGACTTGGT GCTGGAGCTG GTTCGGGCGG AGGGTCTGCC GGCGCGGGAG 
CGGGCGATCT CGCTGGAAGA GTTTTCGGGG GCAGAGGAAA TCTGGATCAC GAGTTCGACC 
CGTGAAGTGT TGCCGGTGGT CGAGCTGGAC GGGCGGCCGG TCGGCCGGGG GAGCCCCGGG 
CCCGTCTGGG AGCGGGTCAG TGCGCTGTAC CAGGACTTCA AGCGCAGGCT CAAGCGTGGC 
ATCACGGCAT GA
 
Protein sequence
MNGPLVYLNG EFLPLDQARV SVLDRGFLFG DGVYEVIPVY GGRPLRLEEH LRRLDDSLRG 
IRMTSPLMRS EWSEIIGRLI DGVDDQSVYV QVTRGVGPAR DHSIPVGVRP TVFAMASPIT 
PVPVTGVRAI TLEDIRWRWC NIKAITLLPN VLLRQQAVDR GCAEAVLVRE GHVTEGTASN 
VFAVVGGTIV TPPKGPELLP GITRDLVLEL VRAEGLPARE RAISLEEFSG AEEIWITSST 
REVLPVVELD GRPVGRGSPG PVWERVSALY QDFKRRLKRG ITA