Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2552 |
Symbol | dnaN |
ID | 3242587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2613533 |
End bp | 2614666 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637169226 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_190093 |
Protein GI | 57865930 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0587336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAAT TCACAATTAA AAGAGATTAT TTTATTAATC AACTTAACGA CACATTAAAG GCTATCTCAC CTAGAACAAC TTTACCGATT TTAACAGGTA TCAAAATTGA TGCTAAAGAA AATGAAGTCA TTTTAACTGG GTCAGATTCA GAAATATCAA TAGAAATCAC TATTCCAAAA CAAGTTGATG GTGAAGAAAT TGTTGAAATT ACAGAAACAG GATCAGTTGT ACTTCCTGGT CGTTTCTTCG TTGATATTAT TAAAAAACTT CCTGGAAAAG AAGTTAAATT ATCAACTAAT GAACAATTCC AAACGTTAAT CACATCAGGT CATTCAGAAT TTAACTTAAG TGGCTTAGAT CCTGATCAAT ACCCATTATT ACCTGAGGTA TCACGAGATG ACGCTATTCA ATTGTCAGTT AAGGTACTAA AAAATATCAT TGCACAAACT AATTTTGCAG TGTCCACCTC AGAAACACGA CCAGTACTTA CTGGTGTAAA CTGGCTTATA CAAGATAATG AATTAATATG CACAGCAACA GATTCACACC GCTTAGCTGT AAGAAAGTTA CAGTTAGAAG ATGAATCAGA AAATAAAAAT GTCATCATTC CTGGTAAAGC TTTATCTGAA TTAAACAAAA TTATGAGTGA CAGCGACGAA GATATTGATA TTTTCTTTGC TTCTAACCAA GTGTTATTCA GAGTGGGGAA TATTAATTTC ATCTCACGTT TACTTGAAGG TCATTATCCA GATACGACAC GTTTATTCCC AGAAAATTAT GAGATTAAAT TAGGAATTAA CAATGGAGAC TTCTATCATG CAATTGATCG TGCATCTTTA TTAGCACGTG AAGGTGGAAA TAATGTTATT AAATTAAGTA CAGGTAATGA ATTAGTTGAA CTTTCATCTA CTTCTCCTGA AATTGGTACT GTTAAAGAAG AAGTTAACGC TAATGATGTA GAAGGCGGAA ACTTGAAAAT TTCTTTCAAC TCAAAATACA TGATGGATGC TTTAAAAGCC ATTGATAATG ATGAAGTAGA AGTAGAATTC TTTGGTACAA TGAAACCATT TATCTTAAAA CCAAAAGATG ATGATTCTGT AACGCAATTA ATTCTGCCTA TTAGAACATA TTAA
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Protein sequence | MMEFTIKRDY FINQLNDTLK AISPRTTLPI LTGIKIDAKE NEVILTGSDS EISIEITIPK QVDGEEIVEI TETGSVVLPG RFFVDIIKKL PGKEVKLSTN EQFQTLITSG HSEFNLSGLD PDQYPLLPEV SRDDAIQLSV KVLKNIIAQT NFAVSTSETR PVLTGVNWLI QDNELICTAT DSHRLAVRKL QLEDESENKN VIIPGKALSE LNKIMSDSDE DIDIFFASNQ VLFRVGNINF ISRLLEGHYP DTTRLFPENY EIKLGINNGD FYHAIDRASL LAREGGNNVI KLSTGNELVE LSSTSPEIGT VKEEVNANDV EGGNLKISFN SKYMMDALKA IDNDEVEVEF FGTMKPFILK PKDDDSVTQL ILPIRTY
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