| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2463 |
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| Symbol | cas1 |
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| ID | 3240725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 2516639 |
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| End bp | 2517544 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 637169137 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_190006 |
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| Protein GI | 57865886 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03639] CRISPR-associated endonuclease Cas1, NMENI subtype |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0610401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGATG TTATTTATGT AGAAAATCAT TACTTTGTTA CTGCGAAGGA AAATAGCATT
AAATTTAGAA ATGTCATAGA TAAAAGTGAA AAATTTTATT TGTTTGAAGA AATTGAAGCT
ATTATTTTTG ATCATTATAA AAGCTATTTT TCACATAAAT TGGTAATTAA ATGTATAGAG
AATGATATTG CGATTATATT TTGTGACAAA AAGCATTCTC CAGTTACACA GCTCATTTCT
TCATATGGCA TGGTTAATCG TCTTAAAAGA ATTCAAAGTC AATTTCAGTT ATCGGGAAGA
ACAAAAGATA GAATTTGGAA AAAGATTGTT ATAAATAAAA TTTTTAACCA AACACGATGT
CTTGAAAATA ATTTACATAA TGAAAATGTT AAGCTGATGT TAGGTTTTGC AAAAGAAGTG
AGTTCAGGAG ACAAAAGTAA TAAAGAAGCA CATGCTACTC GTATTTATTT TAAAGATTTA
TTTGGCAAAC AATTTAAACG TGGACGCTAT AATGATGTTA TCAATTCAGG ATTGAATTAT
GGTTATTCAA TTCTCAGATC TTTTATCAAC AAAGAGTTAG CTATTCATGG ATTTGAAATG
AGCCTAGGTA TTAAACATCA GTCAAAAGAA AATCCATTTA ATTTAGCAGA TGATATCATT
GAAGTTTTTC GTCCTTTTGT AGATAATATA GTGTACGAGA TAGTTTTTAA GAAAAATATT
GATACATTTG ATATAAACGA AAAGAAATTA TTATTAAATG TTTTGTATGA AAGGTGCATT
ATAGATAAAA AAGTAGTGCG ATTACTTGAT AGTGTGAAGA TAGTTATTCA ATCGCTAATT
AGATGTTATG AAGAAAATAC ACCTACTTAT TTATTACTAC CTAAGATGAT AGAGGTGGGA
AACTAA
|
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| Protein sequence | MKDVIYVENH YFVTAKENSI KFRNVIDKSE KFYLFEEIEA IIFDHYKSYF SHKLVIKCIE
NDIAIIFCDK KHSPVTQLIS SYGMVNRLKR IQSQFQLSGR TKDRIWKKIV INKIFNQTRC
LENNLHNENV KLMLGFAKEV SSGDKSNKEA HATRIYFKDL FGKQFKRGRY NDVINSGLNY
GYSILRSFIN KELAIHGFEM SLGIKHQSKE NPFNLADDII EVFRPFVDNI VYEIVFKKNI
DTFDINEKKL LLNVLYERCI IDKKVVRLLD SVKIVIQSLI RCYEENTPTY LLLPKMIEVG
N
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