Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2441 |
Symbol | |
ID | 3242348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2497936 |
End bp | 2499297 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637169116 |
Product | transporter, putative |
Protein accession | YP_189985 |
Protein GI | 57865858 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0973262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGATA CAGATAGAAC ACATAAGGAA AATAAGTTAG AACAAGATAT TACACTACCT TATTTAAAAA AAGCAGTTAT TTTTTCAATT ACTTTTGGTT TCTTTGGTGT AAATATGGCT TTTGCACTTC AATCAGCAAT GATGGGGAGA ATATTCCAAA CGTTAGGAGC TAATCCTAAT AATTTAGGAT GGTTTTTTAT TTTGCCACCT TTAGTAGGAA TGATTGTTCA ACCCCTTATT GGATACTACT CTGACAGAAC TTGGACTAGA TTTGGACGTC GTATGCCGTA TCTGTTGATA GCTGGTCCGA TTGGAGCCAT CGTATTAGTC TTATTACCTA ATGCAGGCTC ATTTAATTTT GGATATGCTT CACTCATGGC TTTATCCTTT GGTGCGGTGA TGACTTTACT TATGGATTTG ACTTCAAATG CATGTATGCA ACCATACAAA ATGATTATTG GCGATATGGT AAACGAAAAA CAAAGAGATA TGGCATGGTC TTGGCAACAA ATTTTTTCAA ATTTAGGTGG TATTATTGCT ACGGTATTAC CATTTTTATT AACAATGTTG GGAATGAGTA ATGTAGCACC TAAAGGTGAA GTACCAATGA CTGTAAAATT AGCTTATTAT ATTGCTGCAG CAGTATTATT AATTGCTTCT ATATGGACAG TTATCTCTGT TAGGGAATAT GAGCCTAAAA CTTATAATTA TTATCATGGA ATCAATGAGA AGAATAGAAA TAATAAATTA AACTTATTAC AGTTATTAAA AAAAGCCCCT AAACAATTTT GGCAAATTAG TGTAGTTCAA TTTTTTAACT GGTTTGCATT GATGTATCTT TGGACATATT CAACAGGTGC AATAGCAAAA AATGTTTGGA ATGTGACAGA CCCTTCTTCA GCCGGATATC AAGCAGCGGG AAATTGGTAT GGCGTATTAT ACTGTATACA ATTTTTGAGT TCAGTTATTT TTGGTTTTGT CATTGCAAGA TCTAAACCAT CCCAAAGAAA ATTTTGGTAT AGCTTTGGAT TGCTTTTCGG TGGAATAGGT CTTATTTCAA TATTCTTTAT CCATAATCAA TGGTTACTCA TTTTTTCATT TATATTGATT GGTATTAATA ATTTAACGAT GAATACACAA CCATTTACAT TATTAACTGA AGCAATCGAT GGAGAAAATT CGGGGGCATA TTTAGGGTTA TTTAATACAA GTATTTGTCT ACCACAAATT GTAGCGTCTA TAGTCAGTTT TGGACTGTAT CCATTATTGG GAAGTTCAAT GCCTGCGATG CTACTGCTTG CAGGAATCAT GATGCTTTTA GGTGCAGTTT CAGTTAAATT TATTAATGCA AAATTTGAAT AG
|
Protein sequence | MNDTDRTHKE NKLEQDITLP YLKKAVIFSI TFGFFGVNMA FALQSAMMGR IFQTLGANPN NLGWFFILPP LVGMIVQPLI GYYSDRTWTR FGRRMPYLLI AGPIGAIVLV LLPNAGSFNF GYASLMALSF GAVMTLLMDL TSNACMQPYK MIIGDMVNEK QRDMAWSWQQ IFSNLGGIIA TVLPFLLTML GMSNVAPKGE VPMTVKLAYY IAAAVLLIAS IWTVISVREY EPKTYNYYHG INEKNRNNKL NLLQLLKKAP KQFWQISVVQ FFNWFALMYL WTYSTGAIAK NVWNVTDPSS AGYQAAGNWY GVLYCIQFLS SVIFGFVIAR SKPSQRKFWY SFGLLFGGIG LISIFFIHNQ WLLIFSFILI GINNLTMNTQ PFTLLTEAID GENSGAYLGL FNTSICLPQI VASIVSFGLY PLLGSSMPAM LLLAGIMMLL GAVSVKFINA KFE
|
| |