| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2398 |
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| Symbol | aap |
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| ID | 3242404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 2454490 |
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| End bp | 2461683 |
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| Gene Length | 7194 bp |
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| Protein Length | 2397 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637169076 |
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| Product | accumulation associated protein |
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| Protein accession | YP_189945 |
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| Protein GI | 57865793 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5373] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR01168] Gram-positive signal peptide, YSIRK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.53067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAAC GTAGACAAGG TCCTATTAAT AAAAAAGTGG ATTTTTTACC TAACAAATTA
AACAAGTATT CTATAAGAAA ATTCACTGTT GGTACGGCCT CAATATTACT TGGTTCGACA
CTTATTTTTG GAAGTAGTAG CCATGAAGCG AAAGCTGCAG AAGAAAAACA AGTTGATCCA
ATTACACAAG CTAATCAAAA TGATAGTAGT GAAAGATCAC TTGAAAACAC AAATCAACCT
ACTGTAAACA ATGAAGCACC ACAGATGTCT TCTACATTGC AAGCAGAAGA AGGAAGCAAT
GCAGAAGCAC CTCAATCTGA GCCAACGAAG GCAGAAGAAG GAGGCAATGC AGAAGCAGCT
CAATCTGAGC CAACGAAGGC AGAAGAAGGA GGCAATGCAG AAGCACCTCA ATCTGAGCCA
ACGAAGGCAG AAGAAGGAGG CAATGCAGAA GCAGCTCAAT CTGAGCCAAC GAAGACAGAA
GAAGGAAGCA ACGTAAAAGC AGCTCAATCT GAGCCAACGA AGGCAGAAGA AGGAAGCAAT
GCAGAAGCAC CTCAATCTGA GCCAACGAAG ACAGAAGAAG GAAGCAACGC AAAAGCAGCT
CAATCTGAGC CAACGAAGGC AGAAGAAGGA GGCAATGCAG AAGCAGCTCA ATCTGAGCCA
ACGAAGACAG AAGAAGGAAG CAATGCAGAA GCACCTCAAT CTGAGCCAAC GAAGGCAGAA
GAAGGAGGCA ATGCAGAAGC ACCTCAATCT GAGCCAACGA AGACAGAAGA AGGAGGCAAT
GCAGAAGCAC CGAATGTTCC AACTATCAAA GCTAATTCAG ATAATGATAC ACAAACACAA
TTTTCAGAAG CCCCTACAAG AAATGACCTA GCTAGAAAAG AAGATATCCC TGCTGTTTCT
AAAAACGAGG AATTACAATC ATCACAACCA AACACTGACA GTAAAATAGA ACCTACAACT
TCAGAACCTG TGAATTTAAA TTATAGTTCT CCGTTTATGT CCTTATTAAG CATGCCTGCT
GATAGTTCAT CCAATAACAC TAAAAATACA ATAGATATAC CGCCAACTAC GGTTAAAGGT
AGAGATAATT ACGATTTTTA CGGTAGAGTA GATATCGAAA GTAATCCTAC AGATTTAAAT
GCGACAAATT TAACGAGATA TAATTATGGA CAGCCACCTG GTACAACAAC AGCTGGTGCA
GTTCAATTTA AAAATCAAGT TAGTTTTGAT AAAGATTTCG ACTTTAACAT TAGAGTAGCA
AACAATCGTC AAAGTAATAC AACTGGTGCA GATGGTTGGG GCTTTATGTT CAGCAAGAAA
GATGGGGATG ATTTCCTAAA AAACGGTGGT ATCTTACGTG AAAAAGGTAC ACCTAGTGCA
GCTGGTTTCA GAATTGATAC AGGATATTAT AATAACGATC CATTAGATAA AATACAGAAA
CAAGCTGGTC AAGGCTATAG AGGGTATGGG ACATTTGTTA AAAATGACTC CCAAGGTAAT
ACTTCTAAAG TAGGATCAGG TACTCCATCA ACAGATTTTC TTAACTACGC AGATAATACT
ACTAATGATT TAGATGGTAA ATTCCATGGT CAAAAATTAA ATAATGTTAA TTTGAAATAT
AATGCTTCAA ATCAAACTTT TACAGCTACT TATGCTGGTA AAACTTGGAC GGCTACGTTA
TCTGAATTAG GATTGAGTCC AACTGATAGT TACAATTTTT TAGTTACATC AAGTCAATAT
GGAAATGGTA ATAGTGGTAC ATACGCAAGT GGCGTTATGA GAGCTGATTT AGATGGTGCA
ACATTGACAT ACACTCCTAA AGCAGTCGAT GGAGATCCAA TTATATCAAC TAAGGAAATA
CCATTTAATA AGAAACGTGA ATTTGATCCA AACTTAGCCC CAGGTACAGA AAAAGTAGTC
CAAAAAGGTG AACCAGGAAT TGAAACAACA ACAACACCAA CTTATGTCAA TCCTAATACA
GGAGAAAAAG TTGGCGAAGG TGAACCAACA GAAAAAATAA CAAAACAACC AGTGGATGAA
ATCGTTCATT ATGGTGGCGA AGAAATCAAG CCAGGCCATA AGGATGAATT TGATCCAAAT
GCACCGAAAG GTAGTCAAAC AACGCAACCA GGTAAGCCGG GGGTTAAAAA TCCTGATACA
GGCGAAGTAG TTACTCCACC TGTGGATGAT GTGACAAAAT ATGGTCCAGT TGATGGAGAT
CCGATCACGT CAACGGAAGA AATTCCATTC GACAAGAAAC GTGAATTCAA TCCTGATTTA
AAACCAGGTG AAGAGCGTGT TAAACAAAAA GGTGAACCAG GAACAAAAAC AATTACAACA
CCAACAACTA AGAACCCATT AACAGGGGAA AAAGTTGGCG AAGGTGAACC AACAGAAAAA
ATAACAAAAC AACCAGTAGA TGAAATCACA GAATATGGTG GCGAAGAAAT CAAGCCAGGC
CATAAGGATG AATTTGATCC AAATGCACCG AAAGGTAGCC AAGAGGACGT TCCAGGTAAA
CCAGGAGTTA AAAACCCTGA TACAGGCGAA GTAGTCACAC CACCAGTGGA TGATGTGACA
AAATATGGTC CAGTTGATGG AGATCCGATC ACGTCAACGG AAGAAATTCC ATTCGACAAG
AAACGTGAAT TCAATCCTGA TTTAAAACCA GGTGAAGAGC GCGTTAAACA GAAAGGTGAA
CCAGGAACAA AAACAATTAC AACACCAACA ACTAAGAACC CATTAACAGG GGAAAAAGTT
GGCGAAGGTG AACCAACAGA AAAAGTAACA AAACAACCAG TAGATGAAAT CACAGAATAT
GGTGGCGAAG AAATCAAGCC AGGCCATAAG GATGAATTTG ATCCAAATGC ACCGAAAGGT
AGCCAAGAGG ACGTTCCAGG TAAACCAGGA GTTAAAAACC CTGATACAGG CGAAGTAGTT
ACTCCACCAG TGGATGATGT GACAAAATAT GGTCCAGTTG ATGGAGATCC GATTACGTCA
ACGGAAGAAA TTCCGTTTGA TAAAAAACGC GAATTTGATC CAAACTTAGC GCCAGGTACA
GAGAAAGTCG TTCAAAAAGG TGAACCAGGA ACAAAAACAA TTACAACACC AACAACTAAG
AACCCATTAA CAGGGGAAAA AGTTGGCGAA GGTGAACCAA CAGAAAAAGT AACAAAACAA
CCAGTGGATG AAATCGTTCA TTATGGTGGC GAAGAAATCA AGCCAGGCCA TAAGGATGAA
TTTGATCCAA ATGCACCGAA AGGTAGCCAA GAGGACGTTC CAGGTAAACC AGGAGTTAAA
AACCCTGATA CAGGCGAAGT AGTCACACCA CCAGTGGATG ATGTGACAAA ATATGGTCCA
GTTGATGGAG ATCCGATTAC GTCAACGGAA GAAATTCCGT TTGATAAAAA ACGCGAATTT
GATCCAAACT TAGCGCCAGG TACAGAGAAA GTCGTTCAAA AAGGTGAACC AGGAACAAAA
ACAATTACAA CACCAACAAC TAAGAACCCA TTAACAGGGG AAAAAGTTGG CGAAGGTGAA
CCAACAGAAA AAGTAACAAA ACAACCAGTG GATGAAATCG TTCATTATGG TGGCGAAGAA
ATCAAGCCAG GCCATAAGGA TGAATTTGAT CCAAATGCAC CGAAAGGTAG CCAAGAGGAC
GTTCCAGGTA AACCAGGAGT TAAAAATCCT GATACAGGCG AAGTAGTCAC ACCACCAGTG
GATGATGTGA CAAAATATGG TCCAGTTGAT GGAGATCCGA TTACGTCAAC GGAAGAAATT
CCATTCGACA AGAAACGTGA ATTCAATCCT GATTTAAAAC CAGGTGAAGA GCGTGTTAAA
CAGAAAGGTG AACCAGGAAC AAAAACAATT ACAACACCAA CAACTAAGAA CCCATTAACA
GGGGAAAAAG TTGGCGAAGG TGAACCAACA GAAAAAATAA CAAAACAACC AGTAGATGAA
ATCACAGAAT ATGGTGGCGA AGAAATCAAG CCAGGCCATA AAGATGAATT TGATCCAAAT
GCACCGAAAG GTAGTCAAAC AACGCAACCA GGTAAGCCAG GAGTTAAAAA TCCTGATACA
GGCGAAGTAG TCACACCACC AGTGGATGAT GTGACAAAAT ATGGTCCAGT TGATGGAGAT
CCGATTACGT CAACGGAAGA AATTCCATTC GACAAGAAAC GTGAATTCAA TCCTGATTTA
AAACCAGGTG AAGAGCGTGT TAAACAAAAA GGTGAACCAG GAACAAAAAC AATTACAACA
CCAACAACTA AGAACCCATT AACAGGGGAA AAAGTTGGCG AAGGTGAACC AACAGAAAAA
ATAACAAAAC AACCAGTAGA TGAAATCACA GAATATGGTG GCGAAGAAAT CAAGCCAGGC
CATAAGGATG AATTTGATCC GAACGCACCG AAAGGTAGCC AAGAGGACGT TCCAGGTAAA
CCAGGAGTTA AAAATCCTGA TACAGGCGAA GTAGTCACAC CACCAGTGGA TGATGTGACA
AAATATGGTC CAGTTGATGG AGATCCGATT ACGTCAACGG AAGAAATTCC ATTCGACAAG
AAACGTGAAT TCAATCCTGA TTTAAAACCA GGTGAAGAGC GTGTTAAACA GAAAGGTGAA
CCAGGAACAA AAACAATTAC AACACCAACA ACTAAGAACC CATTAACAGG GGAAAAAGTT
GGCGAAGGTG AACCAACAGA AAAAATAACA AAACAACCAG TAGATGAAAT CACAGAATAT
GGTGGCGAAG AAATCAAGCC AGGCCATAAG GATGAATTTG ATCCGAACGC ACCGAAAGGT
AGCCAAGAGG ACGTTCCAGG TAAGCCAGGA GTTAAAAATC CTGATACAGG CGAAGTAGTC
ACACCACCAG TGGATGATGT GACAAAATAT GGTCCAGTTG ATGGAGATCC GATTACGTCA
ACGGAAGAAA TTCCGTTTGA TAAAAAACGC GAATTTGATC CAAACTTAGC GCCAGGTACA
GAGAAAGTCG TTCAAAAAGG TGAACCAGGA ACAAAAACAA TTACAACACC AACAACTAAG
AACCCATTAA CAGGGGAAAA AGTTGGCGAA GGTGAACCAA CAGAAAAAAT AACAAAACAA
CCAGTAGATG AAATCACAGA ATATGGTGGC GAAGAAATCA AGCCAGGCCA TAAGGATGAA
TTTGATCCGA ACGCACCGAA AGGTAGCCAA GAGGACGTTC CAGGTAAACC AGGAGTTAAA
AATCCTGATA CAGGCGAAGT AGTCACACCA CCAGTGGATG ATGTGACAAA ATATGGTCCA
GTTGATGGAG ATCCGATTAC GTCAACGGAA GAAATTCCGT TTGATAAAAA ACGCGAATTT
GATCCAAACT TAGCGCCAGG TACAGAGAAA GTCGTTCAAA AAGGTGAACC AGGAACAAAA
ACAATTACAA CACCAACAAC TAAGAACCCA TTAACAGGAG AAAAAGTTGG CGAAGGTGAA
CCAACAGAAA AAATAACAAA ACAACCAGTG GATGAGATCG TTCATTATGG TGGCGAAGAA
ATCAAGACAG GCCATAAGGA TGAATTTGAT CCGAACGCAC CGAAAGGTAG TCAAACAACG
CAACCAGGTA AGCCAGGAGT TAAAAATCCT GATACAGGCG AAGTAGTCAC ACCACCAGTG
GATGATGTGA CAAAATATGG TCCAGTTGAT GGAGATCCGA TTACGTCAAC GGAAGAAATT
CCGTTTGATA AAAAACGCGA ATTTGATCCA AACTTAGCGC CAGGTACAGA GAAAGTCGTT
CAAAAAGGTG AACCAGGAAC AAAAACAATT ACAACGCCAA CAACTAAGAA CCCATTAACA
GGGGAAAAAG TTGGTGAAGG TGAACCAACA GAAAAAATAA CAAAACAACC AGTGGATGAG
ATCGTTCATT ATGGTGGCGA AGAAATCAAG CCAGGCCATA AGGATGAATT TGATCCAAAC
GCACCGAAAG GTAGCCAAGA GGACGTTCCA GGTAAACCAG GAGTTAAAAA TCCTGATACA
GGCGAAGTAG TCACACCACC AGTGGATGAT GTGACAAAAT ATGGTCCAGT TGATGGAGAT
TCGATTACGT CAACGGAAGA AATTCCGTTT GATAAAAAAC GCGAATTTGA TCCAAACTTA
GCGCCAGGTA CAGAGAAAGT CGTTCAAAAA GGTGAACCAG GAACAAAAAC AATTACAACG
CCAACAACTA AGAACCCATT AACAGGAGAA AAAGTTGGCG AAGGTGAACC AACAGAAAAA
ATAACAAAAC AACCAGTGGA TGAGATTGTT CATTATGGTG GTGAACAAAT ACCACAAGGT
CATAAAGATG AATTTGATCC AAATGCACCT GTAGATAGTA AAACTGAAGT TCCAGGTAAA
CCAGGAGTTA AAAATCCTGA TACAGGTGAA GTTGTTACCC CACCAGTGGA TGATGTGACA
AAATATGGTC CAGTTGATGG AGATTCGATT ACGTCAACGG AAGAAATTCC GTTTGATAAA
AAACGCGAAT TTGATCCAAA CTTAGCGCCA GGTACAGAGA AAGTCGTTCA AAAAGGTGAA
CCAGGAACAA AAACAATTAC AACGCCAACA ACTAAGAACC CATTAACAGG AGAAAAAGTT
GGCGAAGGTA AATCAACAGA AAAAGTCACT AAACAACCTG TTGACGAAAT TGTTGAGTAT
GGTCCAACAA AAGCAGAACC AGGTAAACCA GCGGAACCAG GTAAACCAGC GGAACCAGGT
AAACCAGCGG AACCAGGTAC GCCAGCAGAA CCAGGTAAAC CAGCGGAACC AGGTACGCCA
GCAGAACCAG GTAAACCAGC GGAACCAGGT AAACCAGCGG AACCAGGTAA ACCAGCGGAA
CCAGGTAAAC CAGCGGAACC AGGTACGCCA GCAGAACCAG GTACGCCAGC AGAACCAGGT
AAACCAGCGG AACCAGGTAC GCCAGCAGAA CCAGGTAAAC CAGCGGAACC AGGTACGCCA
GCAGAACCAG GTAAACCAGC GGAATCAGGT AAACCAGTGG AACCAGGTAC GCCAGCACAA
TCAGGTGCAC CAGAACAACC AAATAGATCA ATGCATTCAA CAGATAATAA AAATCAATTA
CCTGATACAG GTGAAAATCG TCAAGCTAAT GAGGGAACTT TAGTCGGATC TCTATTAGCA
ATTGTCGGAT CATTGTTCAT ATTTGGTCGT CGTAAAAAAG GTAATGAAAA ATAA
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| Protein sequence | MGKRRQGPIN KKVDFLPNKL NKYSIRKFTV GTASILLGST LIFGSSSHEA KAAEEKQVDP
ITQANQNDSS ERSLENTNQP TVNNEAPQMS STLQAEEGSN AEAPQSEPTK AEEGGNAEAA
QSEPTKAEEG GNAEAPQSEP TKAEEGGNAE AAQSEPTKTE EGSNVKAAQS EPTKAEEGSN
AEAPQSEPTK TEEGSNAKAA QSEPTKAEEG GNAEAAQSEP TKTEEGSNAE APQSEPTKAE
EGGNAEAPQS EPTKTEEGGN AEAPNVPTIK ANSDNDTQTQ FSEAPTRNDL ARKEDIPAVS
KNEELQSSQP NTDSKIEPTT SEPVNLNYSS PFMSLLSMPA DSSSNNTKNT IDIPPTTVKG
RDNYDFYGRV DIESNPTDLN ATNLTRYNYG QPPGTTTAGA VQFKNQVSFD KDFDFNIRVA
NNRQSNTTGA DGWGFMFSKK DGDDFLKNGG ILREKGTPSA AGFRIDTGYY NNDPLDKIQK
QAGQGYRGYG TFVKNDSQGN TSKVGSGTPS TDFLNYADNT TNDLDGKFHG QKLNNVNLKY
NASNQTFTAT YAGKTWTATL SELGLSPTDS YNFLVTSSQY GNGNSGTYAS GVMRADLDGA
TLTYTPKAVD GDPIISTKEI PFNKKREFDP NLAPGTEKVV QKGEPGIETT TTPTYVNPNT
GEKVGEGEPT EKITKQPVDE IVHYGGEEIK PGHKDEFDPN APKGSQTTQP GKPGVKNPDT
GEVVTPPVDD VTKYGPVDGD PITSTEEIPF DKKREFNPDL KPGEERVKQK GEPGTKTITT
PTTKNPLTGE KVGEGEPTEK ITKQPVDEIT EYGGEEIKPG HKDEFDPNAP KGSQEDVPGK
PGVKNPDTGE VVTPPVDDVT KYGPVDGDPI TSTEEIPFDK KREFNPDLKP GEERVKQKGE
PGTKTITTPT TKNPLTGEKV GEGEPTEKVT KQPVDEITEY GGEEIKPGHK DEFDPNAPKG
SQEDVPGKPG VKNPDTGEVV TPPVDDVTKY GPVDGDPITS TEEIPFDKKR EFDPNLAPGT
EKVVQKGEPG TKTITTPTTK NPLTGEKVGE GEPTEKVTKQ PVDEIVHYGG EEIKPGHKDE
FDPNAPKGSQ EDVPGKPGVK NPDTGEVVTP PVDDVTKYGP VDGDPITSTE EIPFDKKREF
DPNLAPGTEK VVQKGEPGTK TITTPTTKNP LTGEKVGEGE PTEKVTKQPV DEIVHYGGEE
IKPGHKDEFD PNAPKGSQED VPGKPGVKNP DTGEVVTPPV DDVTKYGPVD GDPITSTEEI
PFDKKREFNP DLKPGEERVK QKGEPGTKTI TTPTTKNPLT GEKVGEGEPT EKITKQPVDE
ITEYGGEEIK PGHKDEFDPN APKGSQTTQP GKPGVKNPDT GEVVTPPVDD VTKYGPVDGD
PITSTEEIPF DKKREFNPDL KPGEERVKQK GEPGTKTITT PTTKNPLTGE KVGEGEPTEK
ITKQPVDEIT EYGGEEIKPG HKDEFDPNAP KGSQEDVPGK PGVKNPDTGE VVTPPVDDVT
KYGPVDGDPI TSTEEIPFDK KREFNPDLKP GEERVKQKGE PGTKTITTPT TKNPLTGEKV
GEGEPTEKIT KQPVDEITEY GGEEIKPGHK DEFDPNAPKG SQEDVPGKPG VKNPDTGEVV
TPPVDDVTKY GPVDGDPITS TEEIPFDKKR EFDPNLAPGT EKVVQKGEPG TKTITTPTTK
NPLTGEKVGE GEPTEKITKQ PVDEITEYGG EEIKPGHKDE FDPNAPKGSQ EDVPGKPGVK
NPDTGEVVTP PVDDVTKYGP VDGDPITSTE EIPFDKKREF DPNLAPGTEK VVQKGEPGTK
TITTPTTKNP LTGEKVGEGE PTEKITKQPV DEIVHYGGEE IKTGHKDEFD PNAPKGSQTT
QPGKPGVKNP DTGEVVTPPV DDVTKYGPVD GDPITSTEEI PFDKKREFDP NLAPGTEKVV
QKGEPGTKTI TTPTTKNPLT GEKVGEGEPT EKITKQPVDE IVHYGGEEIK PGHKDEFDPN
APKGSQEDVP GKPGVKNPDT GEVVTPPVDD VTKYGPVDGD SITSTEEIPF DKKREFDPNL
APGTEKVVQK GEPGTKTITT PTTKNPLTGE KVGEGEPTEK ITKQPVDEIV HYGGEQIPQG
HKDEFDPNAP VDSKTEVPGK PGVKNPDTGE VVTPPVDDVT KYGPVDGDSI TSTEEIPFDK
KREFDPNLAP GTEKVVQKGE PGTKTITTPT TKNPLTGEKV GEGKSTEKVT KQPVDEIVEY
GPTKAEPGKP AEPGKPAEPG KPAEPGTPAE PGKPAEPGTP AEPGKPAEPG KPAEPGKPAE
PGKPAEPGTP AEPGTPAEPG KPAEPGTPAE PGKPAEPGTP AEPGKPAESG KPVEPGTPAQ
SGAPEQPNRS MHSTDNKNQL PDTGENRQAN EGTLVGSLLA IVGSLFIFGR RKKGNEK
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