| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2333 |
|---|
| Symbol | |
|---|
| ID | 3242555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 2369726 |
|---|
| End bp | 2371429 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637169013 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_189882 |
|---|
| Protein GI | 57865670 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3044] Predicted ATPase of the ABC class |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGTG CCCAAGCACT TGAACAGACT TTAACATCGT TAGACGGTCA AAAGTACGGT
GCGTATAAGC AAATAAAAGA CCTATACGAA TTTAATTTAT TTAAACTACG TATTGACCAT
ATCCAAGCTG ATCCATTTGC GCCACCATCT AAGATGAGTG TTGTTATAGA TCGCCAACAA
GCAAAATTTC CTGATTCTTT ATTAAATTCT GAACTGAAAC AACGGGCTGT GAGTGATTAC
TTAACGCGCG TGTTTCATAA GCAGATTCAA TCAATAGTAG CCCAAGATAA AAAAGTAAGT
AAAATTCAAA TTGATAGTTG TGGCCAAGAA ATCTTAGAGC GTACCGCAGT AGTAATTAAG
AATCGTCAAA TTGAGGCACG TATTGAAGTT GGATTACCAG CACGAGGACG TACCATATTA
GGTAGAATAG CAAGACATAC ACTTATTAAT GTATTACCTC AAATAGTAGA ACATGCCTTA
TGTTATCGCA ACATTAATGT TTCACAATTG GAACAACAAG TTGAATTAAT GATAGATCAA
GAGGAGATTA GACAACAGTT AGTAAAACGT GACCTTGTTG CATTTGTAGC AAATGGTGCT
ATTTTACCAA GAAAAAGTGG TGTTTCAGAT CTCCCTATGA ATAACGCTAT TGAATTTAAA
AGTCCTAAAC AATATGAGAT TGTAATGAAA CTATCGAGTG GCAAAGTTAT TAAGGGTATG
GGTATTCCTA AAGGCATTAC ACTAATAGTT GGAGGCGGTT ATCATGGTAA ATCAACATTA
CTTGAAGCGT TAGAACGAGG TGTATATAAT CATATTGCTG GTGATGGTAG AGAATATGTG
ATCACAAATC AAGATGCAAT GAAAATTCGT GCTGAAGACG GAAGAAGTAT TCAAAATGTT
AATATCCAGC CATTTATTGA TCATTTGCCA GGTGAAAGAG ATACTACACA TTTTTCAACT
GAAAATGCGA GTGGTAGTAC GTCTCAAGCT GCAAATGTCA TGGAAGCTTT AGAATCACAA
GCATCATTGT TACTCATTGA TGAAGATACA TCTGCAACGA ATTTCATGAT TCGTGATGGT
CGTATGCAAC GTTTAATTGC TCCCGAAAAA GAGCCGATTA CCCCCTTTTC TAATAAGGTA
AAAGCATTAT ATGACGACCA TAACGTGTCG ACTATTCTAA TCGTTGGAGG TTCGGGAGAT
TATTTTGACG TGGCAGATCA AGTATTGATG ATGGATGAAT ATGTGTTGAA AGATGTTACG
CAACATGCTA AAGACATTGC GCAGTCAGAC GGTTATCAAA GAAGGCTTTC TTCTCACTAT
CAGTTCGGTC ACATTCCATC AAGAATTCCG TTGAGAGCGA GTTTTAATCA AAAAGGGAAA
CGTGATCGCT TTAAAGCTAA AGGATTGAAT GTAGTAACGT ATGGTAAGGA AACTATTCAT
ATTTCTGGCT TAGAACAACT TGTCGATGAC AGTCAAACAC AAGGTTTAGC GATGATGTTA
AGTTATGTAA AAAATGAATT GCTAGATGAC AAAAGTACGA TTGTAGAATT GACCAATAGT
TTGTATCAAC GGATTGAGAA ACACGGATTA GATGTTATAT CAAATCATCA GGGGCATCCT
GGTCATTTAG CGCTACCTAG AAAGCAGGAG TTTATTGCGA CACTTAATCG ATATCGTAGA
TTAAAAATAA AGCAAAGGGA ATAA
|
|---|
| Protein sequence | MKSAQALEQT LTSLDGQKYG AYKQIKDLYE FNLFKLRIDH IQADPFAPPS KMSVVIDRQQ
AKFPDSLLNS ELKQRAVSDY LTRVFHKQIQ SIVAQDKKVS KIQIDSCGQE ILERTAVVIK
NRQIEARIEV GLPARGRTIL GRIARHTLIN VLPQIVEHAL CYRNINVSQL EQQVELMIDQ
EEIRQQLVKR DLVAFVANGA ILPRKSGVSD LPMNNAIEFK SPKQYEIVMK LSSGKVIKGM
GIPKGITLIV GGGYHGKSTL LEALERGVYN HIAGDGREYV ITNQDAMKIR AEDGRSIQNV
NIQPFIDHLP GERDTTHFST ENASGSTSQA ANVMEALESQ ASLLLIDEDT SATNFMIRDG
RMQRLIAPEK EPITPFSNKV KALYDDHNVS TILIVGGSGD YFDVADQVLM MDEYVLKDVT
QHAKDIAQSD GYQRRLSSHY QFGHIPSRIP LRASFNQKGK RDRFKAKGLN VVTYGKETIH
ISGLEQLVDD SQTQGLAMML SYVKNELLDD KSTIVELTNS LYQRIEKHGL DVISNHQGHP
GHLALPRKQE FIATLNRYRR LKIKQRE
|
|---|
| |