Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2233 |
Symbol | |
ID | 3242542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 2263927 |
End bp | 2264748 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 637168916 |
Product | LysR family transcriptional regulator |
Protein accession | YP_189786 |
Protein GI | 57865640 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.518923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTA ATTATATGAA GGACTTCATT AAAGTTGTCG AGTACAATAG CTTAAATAAA GCTTCTAGAG AATTGAATAT AAGTACACCA GCCTTAAGTA AAAGAATTAG AAGTATTGAA GATTATTTTG ATTGTCAGTT ATTTTATAGA ACTTCTAAGG GTATTTTTTT AACTCAAAAA GGAAATGCTG TTTATCATTC GTTTTTAAAA ATAAACGAGC AATTTGAAGA ATTAAAAAGT AAAATAAGTG AGTCTAAAGA TAAAAGAATT AAATTAGGAG TCATACCTAG CTTTTCTTTA TATAAGCTAC ATGAAAAGAA TTATATTAAT GAAAGTGTCG TTTTAGTTAT TGAAAATAGT ACTTCAATTT TACTTGAGGA AATTTATAAA GATAATATAG ATGTTGTTAT TGGTGATATT ACACATTTAA AAAATAACTC GCTCTATACA CAAGAAATTT ACACTGAGGA CTTTATTGTG GCTTATGGTG ATGAAAATAA GTTTAAAAAC ACTAACCAAG TAAGTATAAA ATCTTTAAAA AATGAGAATA TTTATATACA AACACCGCCA TGTGATACAT ATGATCTTCT TAAAAATTAT TCCTTGAAAG ATAAGTTACA TATTGATTAT GTTGATTATT ATGAAACTAT ATTAGCTAAT GTCAAAGCAA ATAAAGGTAT TACTTTGACT CCTCAATCTT TGACTACAAG ACTTGAAAGT ATGAACTTAT ATCAAAAAAA ATTACAAAGT TATAAAAGAG TTGTAGGCGT AGTATCACGT GATAAAGATA AGATGAATAA AATTATTGAT ATAATTCAGT AA
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Protein sequence | MNFNYMKDFI KVVEYNSLNK ASRELNISTP ALSKRIRSIE DYFDCQLFYR TSKGIFLTQK GNAVYHSFLK INEQFEELKS KISESKDKRI KLGVIPSFSL YKLHEKNYIN ESVVLVIENS TSILLEEIYK DNIDVVIGDI THLKNNSLYT QEIYTEDFIV AYGDENKFKN TNQVSIKSLK NENIYIQTPP CDTYDLLKNY SLKDKLHIDY VDYYETILAN VKANKGITLT PQSLTTRLES MNLYQKKLQS YKRVVGVVSR DKDKMNKIID IIQ
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