Gene SERP1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1953 
Symbol 
ID3242572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1968390 
End bp1969064 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content31% 
IMG OID637168641 
ProductDNA-binding response regulator 
Protein accessionYP_189511 
Protein GI57865389 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATT GCTTAATCGT AGACGATGAT AAAAAGTTAT TGCAATATGT TTCAAGTCAT 
TTAGAAAGAG AAAGTATTCA AACACATACT TTCACAAGTG GAGAAGCATC ACTAGATTTT
CTTGAAAATA AAAATGTTGA TATTGCGATA GTAGATATTA TGATGAGTGG AATGGATGGT
TTTGAGCTTT GTCAGACTTT GAAAGATGAT TATCATATTC CTGTCATAAT GTTAACAGCT
AGAGATGCAT TAAGTGATAA AGAACGTGCA TTTCTAAGTG GGACTGACGA TTATGTCACT
AAACCTTTTG AGGTTAAAGA ATTATTATTT AGAATTAAAG CTGTCTTAAG ACGATATCAA
ATTAATGCTG ATAACGAGTT ACAACTTGGC AACTTAATAT TAAATCAGTC TTACATGGAA
ATTACTGTGG GTTCAAAAAC GATGAATCTT CCAAACAAAG AATTTCAGTT GTTATTTTTA
TTAGCCTCTA ATCCTAAACA TATTTTCACT CGAGATGATA TTATTGAAAA AATTTGGGGC
TTCGATTATG AAGGAGATGA TCGTACTGTT GATGTTCATA TTAAAAGATT ACGTCAACGT
TTATCTAAAT TGAAATCATC AGTATCAATT CAAACTGTAA GAGGTCAAGG ATATAGGGTG
GACCAAAATG TTTAA
 
Protein sequence
MINCLIVDDD KKLLQYVSSH LERESIQTHT FTSGEASLDF LENKNVDIAI VDIMMSGMDG 
FELCQTLKDD YHIPVIMLTA RDALSDKERA FLSGTDDYVT KPFEVKELLF RIKAVLRRYQ
INADNELQLG NLILNQSYME ITVGSKTMNL PNKEFQLLFL LASNPKHIFT RDDIIEKIWG
FDYEGDDRTV DVHIKRLRQR LSKLKSSVSI QTVRGQGYRV DQNV