Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1953 |
Symbol | |
ID | 3242572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1968390 |
End bp | 1969064 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637168641 |
Product | DNA-binding response regulator |
Protein accession | YP_189511 |
Protein GI | 57865389 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAATT GCTTAATCGT AGACGATGAT AAAAAGTTAT TGCAATATGT TTCAAGTCAT TTAGAAAGAG AAAGTATTCA AACACATACT TTCACAAGTG GAGAAGCATC ACTAGATTTT CTTGAAAATA AAAATGTTGA TATTGCGATA GTAGATATTA TGATGAGTGG AATGGATGGT TTTGAGCTTT GTCAGACTTT GAAAGATGAT TATCATATTC CTGTCATAAT GTTAACAGCT AGAGATGCAT TAAGTGATAA AGAACGTGCA TTTCTAAGTG GGACTGACGA TTATGTCACT AAACCTTTTG AGGTTAAAGA ATTATTATTT AGAATTAAAG CTGTCTTAAG ACGATATCAA ATTAATGCTG ATAACGAGTT ACAACTTGGC AACTTAATAT TAAATCAGTC TTACATGGAA ATTACTGTGG GTTCAAAAAC GATGAATCTT CCAAACAAAG AATTTCAGTT GTTATTTTTA TTAGCCTCTA ATCCTAAACA TATTTTCACT CGAGATGATA TTATTGAAAA AATTTGGGGC TTCGATTATG AAGGAGATGA TCGTACTGTT GATGTTCATA TTAAAAGATT ACGTCAACGT TTATCTAAAT TGAAATCATC AGTATCAATT CAAACTGTAA GAGGTCAAGG ATATAGGGTG GACCAAAATG TTTAA
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Protein sequence | MINCLIVDDD KKLLQYVSSH LERESIQTHT FTSGEASLDF LENKNVDIAI VDIMMSGMDG FELCQTLKDD YHIPVIMLTA RDALSDKERA FLSGTDDYVT KPFEVKELLF RIKAVLRRYQ INADNELQLG NLILNQSYME ITVGSKTMNL PNKEFQLLFL LASNPKHIFT RDDIIEKIWG FDYEGDDRTV DVHIKRLRQR LSKLKSSVSI QTVRGQGYRV DQNV
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