| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1948 |
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| Symbol | tcaA |
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| ID | 3242455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1962990 |
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| End bp | 1964378 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 637168636 |
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| Product | tcaA protein |
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| Protein accession | YP_189506 |
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| Protein GI | 57865384 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4640] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAT GCCCAAATTG TGGTCATCAA GTGAAAGATG ATACATCGCA ATGTCCAAAC
TGTGGGCAAC TATTAACTAA GAAGAAAAAA AGAAAGATTA AAGACCAATC ATCTCAATCG
AGTAATGAGA ATTCTACCAA TATACGTCTT CGTAAAATTG TGCCGATAGG TATTAGTGTA
TTTATCTTAA TACTTATTAT CGTGTTATTT TTCCTTTTAA GAAATTATAA TTCGCCTAAT
GCACAAGCTA AGATATTAGT TAATGCTGTA GATAATAATG ATTCACAAAA AGTTGCTACA
TTATTGAGTA CTAAAAATAA AAAAGTAGAC GATGTTGAAG CGCAACAATA TATTAATTAT
GTAAAAAAAG AAGTAGGTAT TAAGAAGTAT ATTCGAGATA TCAATAATAC TGTAGATAAA
TTGAATAAAA GTAATTCAAG CGTGGCATCT TATATACAAA CGAAAAGTGG ACAAGATGTA
CTTAAGATAA GTAAAAATGG TACAAAGTAT TTAATTTTTG ATAATATGAG TTTCACAGCT
CCGACTAAAA AGCCAATTAT TAAACCTAAA GTAGAAACTA AATATGAATT TAGAACAAGT
GGTAAAAAGA AAACTGTCAT TGCTGAAGCA AATAAAAATA CACCTTTGGG TGAATTTATT
CCTGGTACAT ATCATTTACC AGCTAAGAAA ATTACAGAAA ACGGTACATT CAATGGGCAT
TTAAATTTTG ACTTTAGAGA AAGCCACTCT GAAACCGTAG ATGTAGCTGA AGATTATGAT
CAATCATTTA TCAATATCAA ATTTAAGGGT GCGAATAAAT TAAGTGATAA ATCAGAAAAA
GTTCAAATCA ATGACCGTAC ATTCACTTAT TCTCATTCTA AAGAATTTGG TCCTTATCCA
AAAACAAAAG ATATAACGAT TTCTGCAACT GGTAAGGCAA AAGGTAAGAC GTTTAGTTCT
GAGACGAAAA CAATTAGTGC AGACGATTTG AAAGATAATA CGAAAGTTAC ATTGGAATTT
GATAGTGATA AAATAAATAG CTATGTTGAG AAGAAAGAAA AAGAAGAAAA TAGTTTGAAA
AATAAATTAA CTGAATTTTT TACTGGTTAT GCAACGGCTA TGAATTCAGC ATTTAATATG
AATGATTTTA ACTTTATATC GAGTTATTTT AAAAAGAATT CGTCTATATA CACATCAATG
AAAAGTAATT TCCAAAATCG AACGAACGTG ACTATGATAT CTCCGCAAGT GTTAAGTGTT
CATCGAAACG GACATACTGT AAGAACAACT ATTCAACATA TCGATCATAT TGGTAATTAT
ATAAATAAAG ATTATGAATT AGAAATAGAT AATGATGATA GTAATATGCA GTTGGTTAAA
GAATTATAA
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| Protein sequence | MSQCPNCGHQ VKDDTSQCPN CGQLLTKKKK RKIKDQSSQS SNENSTNIRL RKIVPIGISV
FILILIIVLF FLLRNYNSPN AQAKILVNAV DNNDSQKVAT LLSTKNKKVD DVEAQQYINY
VKKEVGIKKY IRDINNTVDK LNKSNSSVAS YIQTKSGQDV LKISKNGTKY LIFDNMSFTA
PTKKPIIKPK VETKYEFRTS GKKKTVIAEA NKNTPLGEFI PGTYHLPAKK ITENGTFNGH
LNFDFRESHS ETVDVAEDYD QSFINIKFKG ANKLSDKSEK VQINDRTFTY SHSKEFGPYP
KTKDITISAT GKAKGKTFSS ETKTISADDL KDNTKVTLEF DSDKINSYVE KKEKEENSLK
NKLTEFFTGY ATAMNSAFNM NDFNFISSYF KKNSSIYTSM KSNFQNRTNV TMISPQVLSV
HRNGHTVRTT IQHIDHIGNY INKDYELEID NDDSNMQLVK EL
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