Gene SERP1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1946 
Symbol 
ID3241283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1961133 
End bp1961684 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content27% 
IMG OID637168634 
ProductTetR family transcriptional regulator 
Protein accessionYP_189504 
Protein GI57865373 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAC GTGCGAAATA TAAAATAATA AAAAGTTTAA TCGAACTTTT AGAATACTAT 
CCTTTTGATG AAATAACCAT TAAAATGATA TGTGCATATA GTGGCGTGAA TCGCTCTACT
TTTTATGATC ATTTTCAAGA TAAATATCAA TTACTAGATA AGATCCAAAA TTATCATTTA
AACAAATATA TATCTTTACT ACAATCTTTC TATAACGATT TTCATCATAT CAAAACAGAT
CAAAAAAAAT TATATAAATT TTTCTTATTG ATAGCCAAAT ATATTAAACG TAAAGAAGCG
TTCTACAGAG CAACACTTGT AACATATCCT AATAAAGATA TTGCATTAGA TTACATTAAC
GCCACTAAAA CATGTTATGA AAAAGTCATG AATAGATATG AAACCTCAAT AAATAATAAA
CGTATGTTTA TCATTTATTC AGTCGGTGGT CAAGCAGGTG TATTTATCGA TTGGTTACGT
AATGGATGCA TCGAATCTCC TCAAGAGGTC GCTCAAGTTC TTTTAGCTAA TACAATTAAA
TTACAACGAT AA
 
Protein sequence
MKQRAKYKII KSLIELLEYY PFDEITIKMI CAYSGVNRST FYDHFQDKYQ LLDKIQNYHL 
NKYISLLQSF YNDFHHIKTD QKKLYKFFLL IAKYIKRKEA FYRATLVTYP NKDIALDYIN
ATKTCYEKVM NRYETSINNK RMFIIYSVGG QAGVFIDWLR NGCIESPQEV AQVLLANTIK
LQR