Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1840 |
Symbol | |
ID | 3241961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1868981 |
End bp | 1869889 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637168533 |
Product | hypothetical protein |
Protein accession | YP_189403 |
Protein GI | 57867739 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.126779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTGAAC AATTTGTCAT AATTATATTA TTAATAGCAC TTGGTTATTT TCTTAAACGT ATGAATTACT TGAAAGCAAC TGATAGTCAA GTACTTTCAA CTTTAGTGTT AAATGTTACA TTACCTTCAC TCGTTATAGT TAACTTAAAT AGTGCAAAAT TAGATGTATC TTTTTCAATA TTACCTATAA TGATGATTAT TTACGGTATA GTAGCTAAAA TTATTGTAAT TTGGTTCTTT AGAAAATATG ATAACCATAT GCGTGGTTCT GTTGGTATGA TGACTGGATC TATGAATATT GGTTTGTTTG CTTATCCGTT GGTTGAAGCG ATATGGCCAT CTAAAGGTAT GATATATTTC GGAATGGTTG ATATTGGTGG GGCCATTATC ATGTTTGGTA TTACTTATTT TGTAGGAAGT TATTTTAGCG AAGGTAGTGA CCAATTTAAC TTCAAATTTT TAGGAAAAAA ATTAGTTCAA TCAGTCCCAT TAGTAACCTA TATGATTATG TTTGGATTGA ACATGTCTCA TATTCATATA TGGCAACCAG CTATTGATTT CTTTAGTGTA TTATCAAAGG CGAATATGCC TTTATCCATG ATATTATTAG GTGTAATGCT TAATTTTAGT ATTGAGAGAG AATACCTCCC TGTAACAATT AAATATCTTT GTTTACATTA CGGGTTAGGT ATGTTAGCTG GAACACTAGT TCACTTTTTA TTACCTGTAT CTGATGATAT GATTAAAACA ACCTTGCTTA TAACGTGGTT ATTACCAGTA GGAGTAGCAA TCATACCATA TTCGATTCAA TTCAAATATA AGACATTACC ATTTGTTGGA ATGGTAACTA ATTTAACCAT TATTATTAGC ATTATCATTT TGTATATTTA TCAAGCTGTA TTTGTATAA
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Protein sequence | MTEQFVIIIL LIALGYFLKR MNYLKATDSQ VLSTLVLNVT LPSLVIVNLN SAKLDVSFSI LPIMMIIYGI VAKIIVIWFF RKYDNHMRGS VGMMTGSMNI GLFAYPLVEA IWPSKGMIYF GMVDIGGAII MFGITYFVGS YFSEGSDQFN FKFLGKKLVQ SVPLVTYMIM FGLNMSHIHI WQPAIDFFSV LSKANMPLSM ILLGVMLNFS IEREYLPVTI KYLCLHYGLG MLAGTLVHFL LPVSDDMIKT TLLITWLLPV GVAIIPYSIQ FKYKTLPFVG MVTNLTIIIS IIILYIYQAV FV
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