Gene SERP1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1830 
SymbolrplD 
ID3241267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp1860770 
End bp1861393 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content38% 
IMG OID637168523 
Product50S ribosomal protein L4 
Protein accessionYP_189393 
Protein GI57867722 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0478396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATT ATGATGTTTT AAAAGTAGAC GGATCAAAAT CAGGTTCAGT TGAATTAAAC 
GATGCAGTAT TTGCTATCGA ACCTAATAAT AGCGTTCTTT TTGAAGCTAT TAACTTACAA 
CGTGCGTCAT TACGCCAAGG TACTCACGCT GTTAAGAATC GTTCAGCAGT ACGTGGTGGT 
GGACGTAAAC CATGGAGACA AAAAGGTACA GGTCGTGCAC GTCAAGGTAC AATCCGTGCT 
CCACAATGGC GTGGTGGTGG TGTAGTATTC GGACCAACAC CAAGAAGCTA TGCATATAAA 
ATGCCAAAGA AAATGCGTCG TTTAGCATTA CGTTCTGCAT TATCTTTTAA AGTTCAAGAA 
AATAGCTTTA CAATTGTAGA TACTTTTGGT TTTGAAGCAC CAAAAACAAA AGAATTCAAA 
AATGTATTAA CTACTCTTGA ACAACCTAAG AAAGTATTAG TTGTAACAGA AAACGAAGAT 
GTAAATGTTG AATTATCAGC ACGTAACATT CCTGGTGTTC AAGTTACAAC TGCTCAAGGA 
TTAAATGTAC TTGATCTAAC AAGCGCTGAC AGTGTAATCA TTACAGAAGC AGCTGCGAAA 
AAAGTTGAGG AGGTGCTCGC ATAA
 
Protein sequence
MANYDVLKVD GSKSGSVELN DAVFAIEPNN SVLFEAINLQ RASLRQGTHA VKNRSAVRGG 
GRKPWRQKGT GRARQGTIRA PQWRGGGVVF GPTPRSYAYK MPKKMRRLAL RSALSFKVQE 
NSFTIVDTFG FEAPKTKEFK NVLTTLEQPK KVLVVTENED VNVELSARNI PGVQVTTAQG 
LNVLDLTSAD SVIITEAAAK KVEEVLA