Gene SERP1790 details

Gene Information

• Locus tag: SERP1790
• Symbol: lacE
• ID: 3241265
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 1836395
• End bp: 1838143
• Gene Length: 1749 bp
• Protein Length: 582 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637168483
• Product: PTS system, lactose-specific IIBC components
• Protein accession: YP_189353
• Protein GI: 57867720
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1440] Phosphotransferase system cellobiose-specific component IIB; [COG1455] Phosphotransferase system cellobiose-specific component IIC
• TIGRFAM ID: [TIGR00394] phosphotransferase system, lactose specific, IIC component; [TIGR00410] PTS system, lactose/cellobiose family IIC component; [TIGR00853] PTS system, lactose/cellobiose family IIB component

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAT TAATAGCATG GATAGAAAAA GGAAAGCCAT TCTTTGAAAA AATATCACGA 
AATATTTATT TAAGAGCGAT TCGTGATGGA TTTATTGCTG CTATTCCAAT TATCTTATTC 
TCAAGTATAT TTATTTTAAT TACCTATGTA CCAAATGTGT TTGGTTTTAC TTGGAGTAAA 
ACTATGGAAG GTATATTGAT GAAACCCTAT AACTATACAA TGGGAATAGT TGGTTTGCTT 
GTAGCAGGAA CCACAGCTAA ATCTTTAACT GATTCTTACA ATCGAAAACT AGATAAAACG 
AATCAGATTA ACTTTATTTC GACAATGATG GCAGCTATTT GTGGATTTTT ATTCTTAGCT 
GCTGATCCTG TTAAAGATGG TGGATTTTCA AGTGCATTTA TGGGAACAAA AGGTTTATTG 
ACAGCCTTTA TTTCTGCGTT TATTACCGTG ATTGTTTATA ATTTCTTTGT CAAAAGAAAT 
ATTACCATTA AAATGCCTAA AGAAGTACCA CCAAATATAT CTCAAGTATT TAAAGATATT 
TTCCCTTTAT CAGCCGTAAT TTTAATTTTG TATGCTTTAG ACTTACTTTC TAGAGCAATA 
GTCCACACGA ATGTAGCAAA TGCAGTATTA AAAGTATTTG AGCCACTATT TACTGCGGCA 
GATGGTTGGA TTGGGGTAAC ACTCATATTC GGTGCGTTTG CGTTCTTCTG GTTTGTAGGT 
ATTCATGGAC CTTCTATTGT TGAACCAGCG ATTGCAGCAA TTACTTATGC GAACCTTGAA 
ACAAATTTAC ACTTAATACA AGCTGGAGAA CATGCTGATA AAGTAATTAC ACCGGGTACA 
CAGATGTTCG TAGCAACTAT GGGAGGAACC GGTGCAACAT TAGTTGTTCC ATTTATGTTT 
ATGTGGTTAA CAAAATCAAA AAGAAATAAA GCGATAGGTA GAGCATCAGT CGTACCTACA 
TTCTTTGGTG TCAATGAACC CATACTTTTT GGTGCACCAC TAGTACTAAA TCCGGTATTC 
TTTATACCTT TTATTTTTGC ACCTATAGTA AATATATGGA TTTTTAAATT TTTTGTTGAT 
GTTTTAAATA TGAATAGTTT TAGTATCTTT TTACCTTGGA CTACTCCTGG TCCACTCGGT 
ATTGTTATGG GGACTGGATT TGCATTTTGG TCATTTGTGT TAGCAATATT ACTTATTGTT 
GTTGATGTGA TTATTTACTA TCCATTCTTA AAAGTATACG ATGAACAAGT GCTTGAAGAA 
GAATTAGGAA ATAAAGAAGC AAATAATGAA TTAAAAGAAA AAGTATCAGC AAACTTTGAT 
ACGAAAAAAG CCGATGCTAT TTTAGCAACT GCAGGGGCAA GTGAAGCGGA TACTGATGAT 
ACATCTTCAG TTGATGAAAC AACTTCTACA TCCTCTACAG ATACTATTAG TGAACAAACA 
AATGTTTTAG TTTTATGTGC AGGTGGAGGT ACAAGTGGTT TACTAGCTAA TGCTTTAAAT 
AAAGCTGCTG AAGAGTATGA AGTACCAGTA AAAGCAGCAG CAGGTGGTTA TGGTGCACAT 
ATGGATATTA TGAAAGATTA TCAATTAATT ATCTTAGCAC CACAAGTTGC TTCGAATTTT 
GAAGATATTA AACAAGATAC TGATCGCTTA GGAATTAAAT TAGCCAAAAC TGAAGGCGCT 
CAATATATCA AGTTAACAAG AGACGGTGAG GCGGCTTTAG AATTTGTAAA ACAACAATTT 
AACAATTAA 

 

Protein sequence

MNKLIAWIEK GKPFFEKISR NIYLRAIRDG FIAAIPIILF SSIFILITYV PNVFGFTWSK 
TMEGILMKPY NYTMGIVGLL VAGTTAKSLT DSYNRKLDKT NQINFISTMM AAICGFLFLA 
ADPVKDGGFS SAFMGTKGLL TAFISAFITV IVYNFFVKRN ITIKMPKEVP PNISQVFKDI 
FPLSAVILIL YALDLLSRAI VHTNVANAVL KVFEPLFTAA DGWIGVTLIF GAFAFFWFVG 
IHGPSIVEPA IAAITYANLE TNLHLIQAGE HADKVITPGT QMFVATMGGT GATLVVPFMF 
MWLTKSKRNK AIGRASVVPT FFGVNEPILF GAPLVLNPVF FIPFIFAPIV NIWIFKFFVD 
VLNMNSFSIF LPWTTPGPLG IVMGTGFAFW SFVLAILLIV VDVIIYYPFL KVYDEQVLEE 
ELGNKEANNE LKEKVSANFD TKKADAILAT AGASEADTDD TSSVDETTST SSTDTISEQT 
NVLVLCAGGG TSGLLANALN KAAEEYEVPV KAAAGGYGAH MDIMKDYQLI ILAPQVASNF 
EDIKQDTDRL GIKLAKTEGA QYIKLTRDGE AALEFVKQQF NN