Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1779 |
Symbol | |
ID | 3241245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1823274 |
End bp | 1825031 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637168473 |
Product | hypothetical protein |
Protein accession | YP_189343 |
Protein GI | 57867701 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4264] Siderophore synthetase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.762831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCATA AGGAATGGCT TTTAGCTGAC AAAAACATCC AATATCGAAC GATTAACGCA ATGATTAAGG AACATATTGT TTCTGAAGGT ATGCGTATTA AAGAAGGTAC GTGTAAAGTT GAAATTTTTC TCAATAATCA CCTTTTATCG TTAAAAGTAG CGCGAAAAAG TGCCTTAAAA AGATACGTTT TTACTGGTGA CATAGTATTA AAAAATAAAA AATTGTCTCA ATCAATTGAA AGTTTAGAAG AACTTCTTCA AATACTAACG GAAATATTTC ATATCAACAT TTCAAAACGA TTATACGATG AATTAATACA TAGTAGGGAT AGTTTGTATG AAACGTACAA ACATTTTTAT AATAGACAAA CACTCATTCA TCAGAGTATG AAATTTAGTA AATTACCCGA TTCTATAAAT TTTATTGCTT GGCTGCAACA TTTACAAGAT AGTGGTATTA CAGATGATTT AAGTTACTCG GAAAGTCTTG TGATAGAAGG GCATCCAACA CATCCTTTAA CAAAAACTAA ATTGCCTCTC AGTACTAATG AATTGAAACT TTATGCACCA GAATTTGAAA AAGTTATTCC ATTAAATATT ATGCTTATTG AAAAAAATCA TGTAGTAACA ACAGCAATAA ATGATGATCA AAATTTTATT CTAAATCAAG TTATTCCTGA ATATCGAGAT CGTTTAAAAT GCTACCTCGA GCCACTTCGA TTAAATCTTA ACGATTACAG AGTGATGTTG ATACATCCTT GGCAGTATGA TCATACTATC GGCGAACAAT TTGAAGAATG GATAGCCAAG AAAATCTTAC TACCTACACC ATTTACTGTT GAGTCCAAAG CTACTTTATC ATTTAGAACA ATGGATTTAA TTCATACACC ATATCATGTG AAATTGCCAG TAAATGTTCA AGCTACAAGT GCTGTTAGAA CAGTTTCATC AGTTACGACT GTAGATGGTC CTAAGTTAAG CCATGCATTA CAAGGATTGC TTCAGGAATT TCCAGAACTT CAAGTCGCGA TGGAACCTTA TGGAGCTTAT GCTCACACGG CATCTGATTT ATCAAAACAA TTAGCGCTTA TCATACGTCA AAAACCTACG ATATATGATT ATGGTTGTAC AGTTGTAACA GCTAGTTTAG TTAATCCTAA TCCAATTGAT AATCAGGCAG TTGTAGATAG TTATTTAAAA TGGATAGAAA ATGAAATCAC ACTTGATCAT ATTAAGCATT TTATAGCAAT TTATACACAA ACCTTAGTTA CACCGCTTAT TGCGTATATT CAAAATTATG GCATAGCACT TGAAGCACAT ATGCAAAATA CGATTGTTAA TCTTGGACCT AATTATAAAA TGAAATTCAT TGTACGTGAT TTAGGTGGTT CTCGTATAGA TTTAAATACA CTTAAACAGA AAGTTCCTCA AATAGATGTT ACAAATGAAA GTCTTATTGC AGATACTATT GAAGAGGTTA TTGCTAAATT TCAACATGCA GTTATTCAAA ATCAACTAGC AGAATTGATT CATCATTTTA ATCAGTATGA TGAAGTAATA GAAGAAGAAT TATTTGAAAT TGTGCGTGAA GAAATCGAAA TGGCAATCGA TAATGACAAG CCACATGCTG AAAAATTGAA AAAAATATTG TTTGGGTCAA CTATCACAGT CAAAGCTTTA TTAAGTATGA GAATGGAAAA TAAAGTGAAA AAATATTTAA ATACCAAGTT AGATAATCCA ATAAAAAAAG AGGTGTAG
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Protein sequence | MNHKEWLLAD KNIQYRTINA MIKEHIVSEG MRIKEGTCKV EIFLNNHLLS LKVARKSALK RYVFTGDIVL KNKKLSQSIE SLEELLQILT EIFHINISKR LYDELIHSRD SLYETYKHFY NRQTLIHQSM KFSKLPDSIN FIAWLQHLQD SGITDDLSYS ESLVIEGHPT HPLTKTKLPL STNELKLYAP EFEKVIPLNI MLIEKNHVVT TAINDDQNFI LNQVIPEYRD RLKCYLEPLR LNLNDYRVML IHPWQYDHTI GEQFEEWIAK KILLPTPFTV ESKATLSFRT MDLIHTPYHV KLPVNVQATS AVRTVSSVTT VDGPKLSHAL QGLLQEFPEL QVAMEPYGAY AHTASDLSKQ LALIIRQKPT IYDYGCTVVT ASLVNPNPID NQAVVDSYLK WIENEITLDH IKHFIAIYTQ TLVTPLIAYI QNYGIALEAH MQNTIVNLGP NYKMKFIVRD LGGSRIDLNT LKQKVPQIDV TNESLIADTI EEVIAKFQHA VIQNQLAELI HHFNQYDEVI EEELFEIVRE EIEMAIDNDK PHAEKLKKIL FGSTITVKAL LSMRMENKVK KYLNTKLDNP IKKEV
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