Gene SERP1768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1768 
Symbol 
ID3242164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1812225 
End bp1813562 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content30% 
IMG OID637168462 
Productdrug transporter, putative 
Protein accessionYP_189332 
Protein GI57867673 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.480202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTTA AGTCTATCAT TACTGTAATG GCACTCATAC TAATAATGTT TATGGCAGCT 
ATAGAAACAT CTATTATTTC ATTAGCATTA CCAACAATAA AAAATAGTTT GAATGCCGGT
AATCTAGTTT CATTAGTATT TACCGTATAT TTTATTGCTT TAGTCATAGC TAACCCTATC
GTTGGTGAAC TTATGTCTAG ATTTAAAATT ATTTACATTG CTGTTGTAGG GGTATTATTG
TTTGCCTTAG GTAGTTTAAT GTCGGGATTA AGTCAGACGT TTACTTTTTT AATTATCTCT
CGAACAGTAC AAGGTTTTGG AGCAGGAGTT ATGATGTCAC TCTCACAAAT AGTTCCTAAG
TTGGCTTTTG AAATTCCTTT GAGATATAAA ATTATGGGTA TAGTTGGAAG TGTTTGGGGA
ATTTCGAGTA TTATTGGCCC ATTATTAGGT GGTGCGATTT TAGAGTTTGC TTCATGGCAT
TGGCTATTCT ATATCAATAT TCCTATTGCT ATAGTGGCAA TAATACTTGT ACTTATGACT
TTTCATTTTC CTGATGAGAC ACAAGTACAA CAGAGTCGTT TTGATATAAA AGGATTGATT
ATCTTTTATA TCTTTATAGC TTTATTAATG TTTGGTTTAC TCAACCAACA TCATATTATT
TTTAACATAT TCTCAATTAT TTTAGCTTTA GCTGTTTTAT GGCTACTATT TAAAATAGAA
AATAGTATCG AACAACCATT TCTTCCAACA AAAGAATTTA ACATATCAAT AGTTCTAGTT
TTTATAACGG ATTTACTTAT TGCGATAACA CTGATGGGAT ATAATTTATA TATACCAGTA
TATTTACAAG AAAAACTTAG TTTATCACCT TTACAAAGTG GATTTGTAAT ATTCCCGTTG
TCTGTTGCTT GGATTACGCT TAATTTCAAT TTAGCTAAAA TAGAAGCGCA TTTTACTAGA
AAAACATTAT ATATTTGCTC ATTTTTTGTT TTATTAGTTA GTAGTCTGAT GATAATGTTT
GGCTTAAAAC TCCCATTGCT TATTGCTTTT GCGGTTGTTT TTGCAGGTTT AAGTTTTGGT
TATATTTATA CAAAAGATAG TGTTATTGTC CAAGAGGAAA CTTCTCCAAA AAATATGAAA
AAGATGATGT CATTTTATGC ATTGACAAAA AATTTAGGTT CGTCAGTCGG ATCTACGATT
ATGGGCTATA TGTATGCACT AAATGTTGGT TTATTTGGTT CTAATTTACA CAATGTATTA
GGATTAGTCT TAATAATTGC AGTATGTTTA ATTGTAATGT GGATGACATT ATATAAAAGC
AATACTATTC AATCTTAG
 
Protein sequence
MNLKSIITVM ALILIMFMAA IETSIISLAL PTIKNSLNAG NLVSLVFTVY FIALVIANPI 
VGELMSRFKI IYIAVVGVLL FALGSLMSGL SQTFTFLIIS RTVQGFGAGV MMSLSQIVPK
LAFEIPLRYK IMGIVGSVWG ISSIIGPLLG GAILEFASWH WLFYINIPIA IVAIILVLMT
FHFPDETQVQ QSRFDIKGLI IFYIFIALLM FGLLNQHHII FNIFSIILAL AVLWLLFKIE
NSIEQPFLPT KEFNISIVLV FITDLLIAIT LMGYNLYIPV YLQEKLSLSP LQSGFVIFPL
SVAWITLNFN LAKIEAHFTR KTLYICSFFV LLVSSLMIMF GLKLPLLIAF AVVFAGLSFG
YIYTKDSVIV QEETSPKNMK KMMSFYALTK NLGSSVGSTI MGYMYALNVG LFGSNLHNVL
GLVLIIAVCL IVMWMTLYKS NTIQS