Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1768 |
Symbol | |
ID | 3242164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1812225 |
End bp | 1813562 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637168462 |
Product | drug transporter, putative |
Protein accession | YP_189332 |
Protein GI | 57867673 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.480202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTTA AGTCTATCAT TACTGTAATG GCACTCATAC TAATAATGTT TATGGCAGCT ATAGAAACAT CTATTATTTC ATTAGCATTA CCAACAATAA AAAATAGTTT GAATGCCGGT AATCTAGTTT CATTAGTATT TACCGTATAT TTTATTGCTT TAGTCATAGC TAACCCTATC GTTGGTGAAC TTATGTCTAG ATTTAAAATT ATTTACATTG CTGTTGTAGG GGTATTATTG TTTGCCTTAG GTAGTTTAAT GTCGGGATTA AGTCAGACGT TTACTTTTTT AATTATCTCT CGAACAGTAC AAGGTTTTGG AGCAGGAGTT ATGATGTCAC TCTCACAAAT AGTTCCTAAG TTGGCTTTTG AAATTCCTTT GAGATATAAA ATTATGGGTA TAGTTGGAAG TGTTTGGGGA ATTTCGAGTA TTATTGGCCC ATTATTAGGT GGTGCGATTT TAGAGTTTGC TTCATGGCAT TGGCTATTCT ATATCAATAT TCCTATTGCT ATAGTGGCAA TAATACTTGT ACTTATGACT TTTCATTTTC CTGATGAGAC ACAAGTACAA CAGAGTCGTT TTGATATAAA AGGATTGATT ATCTTTTATA TCTTTATAGC TTTATTAATG TTTGGTTTAC TCAACCAACA TCATATTATT TTTAACATAT TCTCAATTAT TTTAGCTTTA GCTGTTTTAT GGCTACTATT TAAAATAGAA AATAGTATCG AACAACCATT TCTTCCAACA AAAGAATTTA ACATATCAAT AGTTCTAGTT TTTATAACGG ATTTACTTAT TGCGATAACA CTGATGGGAT ATAATTTATA TATACCAGTA TATTTACAAG AAAAACTTAG TTTATCACCT TTACAAAGTG GATTTGTAAT ATTCCCGTTG TCTGTTGCTT GGATTACGCT TAATTTCAAT TTAGCTAAAA TAGAAGCGCA TTTTACTAGA AAAACATTAT ATATTTGCTC ATTTTTTGTT TTATTAGTTA GTAGTCTGAT GATAATGTTT GGCTTAAAAC TCCCATTGCT TATTGCTTTT GCGGTTGTTT TTGCAGGTTT AAGTTTTGGT TATATTTATA CAAAAGATAG TGTTATTGTC CAAGAGGAAA CTTCTCCAAA AAATATGAAA AAGATGATGT CATTTTATGC ATTGACAAAA AATTTAGGTT CGTCAGTCGG ATCTACGATT ATGGGCTATA TGTATGCACT AAATGTTGGT TTATTTGGTT CTAATTTACA CAATGTATTA GGATTAGTCT TAATAATTGC AGTATGTTTA ATTGTAATGT GGATGACATT ATATAAAAGC AATACTATTC AATCTTAG
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Protein sequence | MNLKSIITVM ALILIMFMAA IETSIISLAL PTIKNSLNAG NLVSLVFTVY FIALVIANPI VGELMSRFKI IYIAVVGVLL FALGSLMSGL SQTFTFLIIS RTVQGFGAGV MMSLSQIVPK LAFEIPLRYK IMGIVGSVWG ISSIIGPLLG GAILEFASWH WLFYINIPIA IVAIILVLMT FHFPDETQVQ QSRFDIKGLI IFYIFIALLM FGLLNQHHII FNIFSIILAL AVLWLLFKIE NSIEQPFLPT KEFNISIVLV FITDLLIAIT LMGYNLYIPV YLQEKLSLSP LQSGFVIFPL SVAWITLNFN LAKIEAHFTR KTLYICSFFV LLVSSLMIMF GLKLPLLIAF AVVFAGLSFG YIYTKDSVIV QEETSPKNMK KMMSFYALTK NLGSSVGSTI MGYMYALNVG LFGSNLHNVL GLVLIIAVCL IVMWMTLYKS NTIQS
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