| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1471 |
|---|
| Symbol | |
|---|
| ID | 3241913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1536645 |
|---|
| End bp | 1537202 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 637168154 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_189038 |
|---|
| Protein GI | 57867334 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4709] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000226091 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAA TAACCTTCTT AAATGAATTA GAATTAGCTT TAGATGATTT ACCTAGGGAA
GAAAAAGATA GTATTATGCA CAAGTATGAA AACTTGTTCT ATGAAGAAGA ATTGAAAGGG
ATTAGTGAAT CACAAATTAT AAAAAAGTTA AATGATCCTT ATCATATTTC CAAAGAAGTA
AAAGCTAGAA GTGCTATTCA TTATGCTAGT TACAAACCAA CCTTAGCAAA CATAGTAAGA
GCAATACTAG CATCGTTAAG TCTTGGTATT TTGTCGTTAT TTATTATTTT AATACCGGTT
GTTATCATTG CATTACTTAT TCTATTCTGT TTCCTTATTT CTATTTGTTT TATCTTTGCA
CCATTTGTTT TATTATTTTA TTCAGTATTA CATGGTTTCG AAAATGCTAT AAGTAATGTG
TTTTTTTCAA TTTCTTTTAC AGGTTTAGGA ATTATGTTTA TTGTTATTAC TTTGAAAATT
GGTGAAATAA TTCATAAACT TATTTTGAAA TATCTTCTTT GGTATATAAA GACTGTTAAA
GGAAGCGTTA AAGAATGA
|
|---|
| Protein sequence | MDKITFLNEL ELALDDLPRE EKDSIMHKYE NLFYEEELKG ISESQIIKKL NDPYHISKEV
KARSAIHYAS YKPTLANIVR AILASLSLGI LSLFIILIPV VIIALLILFC FLISICFIFA
PFVLLFYSVL HGFENAISNV FFSISFTGLG IMFIVITLKI GEIIHKLILK YLLWYIKTVK
GSVKE
|
|---|
| |