Gene SERP1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1401 
SymbolhemL-2 
ID3242848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1464964 
End bp1466253 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content37% 
IMG OID637168086 
Productglutamate-1-semialdehyde aminotransferase 
Protein accessionYP_188970 
Protein GI57867296 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID[TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA CTGAAAGCGA ACGTCTTCAG CAACTTTCTA ATGAATATAT TTTGGGAGGT 
GTGAATTCAC CTTCAAGGTC GTATAAAGCA GTAGGTGGTG GGGCACCAGT AGTAATGAAA
GAAGGTCATG GCGCTTACTT ATATGATGTA GATGGTAATA AATATATCGA CTATCTACAA
GCTTATGGTC CAATAATAAC TGGTCATGCA CACCCACATA TCACCGAAGC TATCCAAGAT
CAAGCAGCAA AAGGCGTACT TTATGGTACC CCTACTGAAT TAGAAATAAA TTTCTCAAAA
AAACTTAGAG AAGCAGTTCC TTCTTTAGAA AAGATTCGTT TCGTGAACTC TGGTACTGAA
GCAGTTATGA CAACAATTAG AGTTGCTCGT GCTTATACTA AAAGAAACAA AATCATTAAG
TTTGCAGGCT CTTATCATGG TCATTCTGAT TTAGTTTTAG TGGCAGCTGG AAGTGGACCT
TCTCAACTTG GTTCTCCAGA TTCTGCTGGT GTCCCCCAAA GTGTTGCACA AGAGGTTATT
ACAGTACCGT TTAATGATAT AGAATCATAT AGAGAAGCTA TTGATTATTG GAAAGACGAC
ATTGCTGCAG TATTAGTAGA GCCGATTGTG GGTAATTTTG GGATGGTCAT GCCACAACCA
GGTTTCTTAG AAGAAGTAAA TAAAATTTCT CATGATAATG GAACATTAGT TATCTATGAT
GAAGTTATCA CTGCTTTTCG TTTCCATTAT GGTGCAGCTC AAGATTTATT AGGTGTTAAA
CCAGACCTCA CTGCTTTTGG TAAGATTGTT GGCGGTGGTT TACCAATTGG AGGCTATGGT
GGTCGACAAG ATATTATGGA GCACGTTGCA CCATTAGGTC CAGCTTATCA AGCAGGAACA
ATGGCCGGTA ACCCGTTATC TATGAGAGCA GGTATTGCTT TATTAGAGGT ACTTGAACAA
GAAGGTGTTT ATGATAAACT TGATCAATTA GGTCGTCGTC TTGAAGAAGG GTTACAAAAA
TTAATAGATA AGCATCATAT TACAGCAACA ATAAATCGAA TCTATGGCTC ACTGACATTG
TATTTCACAA ATGAAAAAGT TACACATTAT GAACAAGTTG AAAACTCTGA TGGAGATGCT
TTCGCTCAAT TCTTTAAATT AATGTTGAAC CAAGGCATTA ATCTCGCGCC TTCTAAATTT
GAAGCATGGT TCTTAACTAC AGAACATACT GAAGAAGATA TCGATCGCAC ACTAGAAGCA
GCTGATTATG CATTTAGTAA AATGAAATAA
 
Protein sequence
MKFTESERLQ QLSNEYILGG VNSPSRSYKA VGGGAPVVMK EGHGAYLYDV DGNKYIDYLQ 
AYGPIITGHA HPHITEAIQD QAAKGVLYGT PTELEINFSK KLREAVPSLE KIRFVNSGTE
AVMTTIRVAR AYTKRNKIIK FAGSYHGHSD LVLVAAGSGP SQLGSPDSAG VPQSVAQEVI
TVPFNDIESY REAIDYWKDD IAAVLVEPIV GNFGMVMPQP GFLEEVNKIS HDNGTLVIYD
EVITAFRFHY GAAQDLLGVK PDLTAFGKIV GGGLPIGGYG GRQDIMEHVA PLGPAYQAGT
MAGNPLSMRA GIALLEVLEQ EGVYDKLDQL GRRLEEGLQK LIDKHHITAT INRIYGSLTL
YFTNEKVTHY EQVENSDGDA FAQFFKLMLN QGINLAPSKF EAWFLTTEHT EEDIDRTLEA
ADYAFSKMK