Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1372 |
Symbol | |
ID | 3242855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1429360 |
End bp | 1430100 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637168026 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_188941 |
Protein GI | 57867303 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00133001 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTAA AAGTTGAACA TCTTACAGGG GGATATGGAA AAAAACCTGT AATTAAAGAT TTGAATTTTG AATTAGAAAA AGGTGAAATT GTAGGTTTAA TAGGTCTAAA TGGTGCTGGG AAAAGTACTA CAATTAAACA TATGCTAGGA TTGATTAATC CAATGGAAGG CAAATTATCA ATTTCAAATA TTAAAATTAA TGAAGATATT GAAAATTATA GAAGAAAGTT ATCTTATATA CCTGAATCAC CAGTCATCTA TGATGAACTA ACTTTAGAGG AGCACATTGA AATGACGGCG ATGGCTTATC AATTAAGTAG AGAAGAGGCT ATGCGTAGAG CTAAACCATT ACTTAAAGTT TTTAGATTAG AAAATGAACT TAAAGTATTT CCAAGTCATT TTTCTAAAGG GATGAAACAA AAAGTGATGA TTATTTGTGC ATTTATAGTT GATCCAGAAT TATATATTAT TGACGAACCT TTCCTCGGTT TAGATCCTTT GGGGATACAG TCTATGTTAG ATTTAATGGT AGAAAAAAGA AATGAAAATC GAACAGTATT AATGAGTACA CATATTTTGG CTACAGCCGA AAGGTATTGT GATAGATTTA TTATTTTAGA AAAAGGTGAA ATTGTTGCAT TTGGTAATCT TGATGAGTTA CGGGAACAAA CAGGATTAAA AGATAAAACT TTAGATGATA TTTACATCCA TGTCACACAA GGTAGTAGTG CTTATGAATA A
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Protein sequence | MTVKVEHLTG GYGKKPVIKD LNFELEKGEI VGLIGLNGAG KSTTIKHMLG LINPMEGKLS ISNIKINEDI ENYRRKLSYI PESPVIYDEL TLEEHIEMTA MAYQLSREEA MRRAKPLLKV FRLENELKVF PSHFSKGMKQ KVMIICAFIV DPELYIIDEP FLGLDPLGIQ SMLDLMVEKR NENRTVLMST HILATAERYC DRFIILEKGE IVAFGNLDEL REQTGLKDKT LDDIYIHVTQ GSSAYE
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