Gene SERP1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1372 
Symbol 
ID3242855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1429360 
End bp1430100 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content30% 
IMG OID637168026 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_188941 
Protein GI57867303 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00133001 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGTAA AAGTTGAACA TCTTACAGGG GGATATGGAA AAAAACCTGT AATTAAAGAT 
TTGAATTTTG AATTAGAAAA AGGTGAAATT GTAGGTTTAA TAGGTCTAAA TGGTGCTGGG
AAAAGTACTA CAATTAAACA TATGCTAGGA TTGATTAATC CAATGGAAGG CAAATTATCA
ATTTCAAATA TTAAAATTAA TGAAGATATT GAAAATTATA GAAGAAAGTT ATCTTATATA
CCTGAATCAC CAGTCATCTA TGATGAACTA ACTTTAGAGG AGCACATTGA AATGACGGCG
ATGGCTTATC AATTAAGTAG AGAAGAGGCT ATGCGTAGAG CTAAACCATT ACTTAAAGTT
TTTAGATTAG AAAATGAACT TAAAGTATTT CCAAGTCATT TTTCTAAAGG GATGAAACAA
AAAGTGATGA TTATTTGTGC ATTTATAGTT GATCCAGAAT TATATATTAT TGACGAACCT
TTCCTCGGTT TAGATCCTTT GGGGATACAG TCTATGTTAG ATTTAATGGT AGAAAAAAGA
AATGAAAATC GAACAGTATT AATGAGTACA CATATTTTGG CTACAGCCGA AAGGTATTGT
GATAGATTTA TTATTTTAGA AAAAGGTGAA ATTGTTGCAT TTGGTAATCT TGATGAGTTA
CGGGAACAAA CAGGATTAAA AGATAAAACT TTAGATGATA TTTACATCCA TGTCACACAA
GGTAGTAGTG CTTATGAATA A
 
Protein sequence
MTVKVEHLTG GYGKKPVIKD LNFELEKGEI VGLIGLNGAG KSTTIKHMLG LINPMEGKLS 
ISNIKINEDI ENYRRKLSYI PESPVIYDEL TLEEHIEMTA MAYQLSREEA MRRAKPLLKV
FRLENELKVF PSHFSKGMKQ KVMIICAFIV DPELYIIDEP FLGLDPLGIQ SMLDLMVEKR
NENRTVLMST HILATAERYC DRFIILEKGE IVAFGNLDEL REQTGLKDKT LDDIYIHVTQ
GSSAYE