| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1313 |
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| Symbol | |
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| ID | 3241692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1362053 |
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| End bp | 1363714 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637167962 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_188885 |
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| Protein GI | 57867195 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.221909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA GTAAAGAAAT GGTTCGTGGA ACCTTTTTAA TTACAATAAG TATTTTAATT
ACAAAAGTAT TAGGTGTCTT ATTTATTATT CCGTTTACTG CTTTAATAGG TGGACAAGCC
AACATGGCAC CTTTTACTTA TGCTTATGCA CCATACAATA TAGCTATAGC TATAGCAACA
GCTGGTGTTC CGCTTGCCGC GTCAAAATAT GTTGCTAAAT ATAATGCACT AGGTGCATAT
AAGGTCAGTC AGAAGTTTTA TAAATCAAGT TTTGTAGTCA TGAGTATTAC AGGAATTGTA
GGTTTCCTAG TTTTATATTT ATTAGCACCA TACATAGCTG AACTAACCTT ATCACGTAAT
ACTCATGGTA ATAGTGGATG GACAGTAGCT GATATCACTT GGATTATTAG AATAATAAGT
ATGGTAGTTA TATTTATTCC AGTTCTCGCA ACTTGGAGAG GAATATTTCA AGGATACAAA
TCGATGGGAC CTACTGCAGT GTCAGAAGTT ACAGAGCAAA TTGCAAGAAT TGTATTTATT
TTAGTAGGTA GTTATTTAAC GCTCAATGTA TTTGGAGGTA CAGTTCTTCA GGCAAATGGT
ATTGCAACGT TTGCAGCTGC AATAGGTGCA ATCGCAGGAA TACTTACATT ATGGTATTAC
TGGATTAAAA GAAGAAAAAA TATTAAAAAA ATGGTCGACT CAGATACAGC GAATCTAAAT
GTTTCATACG GGAAAATGTA TAAAGAAATT ATTGCTTATA GTATACCGTT TGTCATAGTA
AGTTTGAATT TTCCACTATT TAATTTGGTC GATCAGTTTA CTCATAATGG TGCGCTTAAC
CTTGTAGGTG TCAAACCTGG TTTGCAAGAT ATATTCTTTA ACATGTTAAA CATGTCTACA
AACAAAATAG TAATGATTCC AACATCATTA AGTGCTGGAT TTGCTGTCAG TTTAATACCA
TTTATAACTA AAACCTATGA AGAAGGTAGA TATGCAGAGA TGCATCGACA AATTAGAACT
TCGATTGGAG TTTTAATGTT CATTACTGTT CCAGCTAGTA TTGGTATCAT GGCATTAGCG
CAACCTTTGT TCACAGTATT CTATGGTTTT GATCCAGTTG TTCACGGTCA CGATCCAAAT
TTCGATGGAA GTAGATTATT ATTTTATTAT GCTCCTGTTG CAATTTTAAT TTCATTATTA
AGTGTTACAG CATCAATGTT ACAGGGTATC GATAAACAAA AACTAACAGT TTTTATTATT
TTAGGATCTG TTTTAATTAA ACTGATTCTC AATTATCCTT TAATTATGTT ATTACACACA
CCTGGCGCTG TATTAAGTAC AGCAATAGCT TTATTATTTG CAATTTGTTG CAATTTCTAT
ATTCTTAAAA AATATGCAAA CTTTAAATTT AGTTACAGTT GGATACATTT AGCTAAGATT
ATTCTAATTT CAATCATCAT GATGATTGGG GTTGAGGTGA TTTTCTTCAT TTTAAGATTA
TTCTTGGAAC CAACTAGATT TAATTACTTG ATTATTGTTG CAATTGGTGT CATTGTGGGA
GCAATCATTT ATGGTGGTAT TACAATCAAG ACTAAATTAG CTGATGAATT TTTAGGTGAT
ATTCCCGCTA AAATAAGACG TAAAGTGAAG ATGTTGCGAT GA
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| Protein sequence | MSESKEMVRG TFLITISILI TKVLGVLFII PFTALIGGQA NMAPFTYAYA PYNIAIAIAT
AGVPLAASKY VAKYNALGAY KVSQKFYKSS FVVMSITGIV GFLVLYLLAP YIAELTLSRN
THGNSGWTVA DITWIIRIIS MVVIFIPVLA TWRGIFQGYK SMGPTAVSEV TEQIARIVFI
LVGSYLTLNV FGGTVLQANG IATFAAAIGA IAGILTLWYY WIKRRKNIKK MVDSDTANLN
VSYGKMYKEI IAYSIPFVIV SLNFPLFNLV DQFTHNGALN LVGVKPGLQD IFFNMLNMST
NKIVMIPTSL SAGFAVSLIP FITKTYEEGR YAEMHRQIRT SIGVLMFITV PASIGIMALA
QPLFTVFYGF DPVVHGHDPN FDGSRLLFYY APVAILISLL SVTASMLQGI DKQKLTVFII
LGSVLIKLIL NYPLIMLLHT PGAVLSTAIA LLFAICCNFY ILKKYANFKF SYSWIHLAKI
ILISIIMMIG VEVIFFILRL FLEPTRFNYL IIVAIGVIVG AIIYGGITIK TKLADEFLGD
IPAKIRRKVK MLR
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