| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1310 |
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| Symbol | |
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| ID | 3240858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1359201 |
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| End bp | 1360610 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637167959 |
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| Product | dipeptidase PepV |
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| Protein accession | YP_188882 |
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| Protein GI | 57867192 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01887] dipeptidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000129958 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGAAAG AAAAGGTTCT AGAGTACGAA AATCAAATGA TTGAAGATCT TAAAGGTTTA
TTATCTATAG AAAGCATCAG AGATGATTCT AAAGCCACTG CTGATGCACC TGTGGGACCA
GGACCGAGAG AAGCTCTTGA TTACATGTAC AATTTAGGTA AAAGAGATGG TTTTTCAACG
CATGACGTTG ATCATATAGC TGGTAGAATT GAAGCTGGTA AAGGAGAAGA TGTATTAGGT
ATTTTATGTC ATGTCGATGT AGTACCCGCA GGCGATGGGT GGGATTCAAA CCCATTCCAA
CCAGTAGTGA CAGACAATGC AATTATAGCC AGAGGGACAC TGGATGATAA AGGACCCACC
ATTGCTGCCT ATTATGCAGT TAAAATTTTA AATGAGATGA AGGTAGATTG GAAAAAACGT
ATACACATTA TTATCGGAAC TGATGAAGAA TCAGATTGGA AATGTACAGA CAGATATTTC
AAAACAGAAG AAATGCCTGC CTTAGGTTTT GCTCCAGATG CAGAATTCCC AGCAATACAT
GGTGAAAAAG GTATAACAAC CTTTGATTTA GTACAAAATG AAGTGACAGA AGATACAGAT
GAACCTGACT ATGAGTTATT AAAATTTGAA TCTGGTCAAA GATACAATAT GGTTCCTGAT
TATGCTAAGG CAGAAGTGCT CGTCAAAGAA AATATGACAG ATGTCATTCA AAACTTTGAA
AACTTTTTAC AACAAAATCA ACTACAAGGT GAAAGTACAG TTGACAGTGG TATTTTAATA
TTAACAATTG AGGGTAAAGC AGTTCATGGC ATGGATCCAT CTTTAGGTGT TAATGCAGGA
TTGTTTTTAC TTAAATTTTT AGCAAGTCTT AATCTAAATA AAAGCGCAAA AGATTTCGTA
GAATTCAATG AGCGATACTT ATTTGAATCT CACTTTGGTG AAAAAATGGG TATGAAGTTC
CATACTGATA TTATGGGAGA TGTCACTACT AATATCGGGG TTATCAGTTA TGATAAAGAA
AAAGCAGGCC GTTATGGTAT TAATCTAAGA TATCCCGAAG GATTTAAATT TGAAGACGCA
ATCGATAGAT TTAGAAGTGA AATTAATGAA CTAGGTTTTA ATTTAGAACT TGGCAAAGTT
CAAAAACCAC ACTATGTCGA TAAAAATGAT CCATTTGTAA AAACACTTGT AAACGCATAT
AGAAATCAAA CAGGTGATAT GACTGAACCA TATACGATTG GTGGAGGAAC ATATGCGAGA
AATTTAGATA AGGGTGTCGC ATTTGGTGCG ATGTTTGCAG ATTCAGAAGA TTTAATGCAT
CAAAAAAATG AGTATATAAC TAAAAAGCAA TTGATCAATG CAACAAGTAT TTATTTAGAA
GCTATTTACG CTTTATGTGT GGAGGATTAA
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| Protein sequence | MWKEKVLEYE NQMIEDLKGL LSIESIRDDS KATADAPVGP GPREALDYMY NLGKRDGFST
HDVDHIAGRI EAGKGEDVLG ILCHVDVVPA GDGWDSNPFQ PVVTDNAIIA RGTLDDKGPT
IAAYYAVKIL NEMKVDWKKR IHIIIGTDEE SDWKCTDRYF KTEEMPALGF APDAEFPAIH
GEKGITTFDL VQNEVTEDTD EPDYELLKFE SGQRYNMVPD YAKAEVLVKE NMTDVIQNFE
NFLQQNQLQG ESTVDSGILI LTIEGKAVHG MDPSLGVNAG LFLLKFLASL NLNKSAKDFV
EFNERYLFES HFGEKMGMKF HTDIMGDVTT NIGVISYDKE KAGRYGINLR YPEGFKFEDA
IDRFRSEINE LGFNLELGKV QKPHYVDKND PFVKTLVNAY RNQTGDMTEP YTIGGGTYAR
NLDKGVAFGA MFADSEDLMH QKNEYITKKQ LINATSIYLE AIYALCVED
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