| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1309 |
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| Symbol | dat |
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| ID | 3240857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1358349 |
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| End bp | 1359197 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637167958 |
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| Product | D-alanine aminotransferase |
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| Protein accession | YP_188881 |
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| Protein GI | 57867191 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00550682 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAAAG TTTTTATAAA TGGTGAATTT GTTAATGAAG AGGATGCTAA GGTTTCATAC
GAAGATCGAG GCTACGTGTT TGGGGACGGA ATCTATGAAT ATATACGGGC ATATGATGGG
AAATTGTTTA CCGTTAAAGA GCATTTTGAA AGATTTTTAA GAAGTGCTGA AGAAATAGGA
CTAGATTTAA ATTATACTAT TGAGGAATTA ATTGAATTAG TACGCCGATT ATTAAAAGAA
AATAATGTAG TGAATGGCGG TATTTATATA CAAGCTACTC GTGGTGCTGC TCCTCGAAAT
CATTCATTTC CTACACCACC TGTAAAACCT GTTATTATGG CGTTTACAAA AAGTTATGAT
AGACCTTATG AAGAATTAGA ACAAGGAGTT TATGCCATTA CAACTGAAGA CATTAGATGG
TTACGTTGTG ATATTAAAAG TTTAAATTTA TTAGGAAATG TATTAGCTAA AGAATATGCT
GTTAAATATA ATGCTGCAGA GGCTATACAA CACCGAGGTG ATATTGTCAC TGAGGGTGCA
TCTAGTAATG TTTACGCAAT TAAAGATGGA GTGATATACA CGCATCCAGT TAATAATTTT
ATATTGAACG GAATTACTCG CCGTGTCATA AAATGGATAG CAGAGGATGA ACAAATACCA
TTCAAAGAAG AAAAATTTAC AGTAGAATTT CTTAAAAGTG CTGATGAAGT TATCATTTCT
AGTACTTCTG CAGAAGTTAT GCCAATTACA AAAATTGATG GTGAAAATGT TCAAGACGGA
CAAGTTGGTA CTATAACACG ACAATTACAA CAAGGATTTG AAAAGTATAT TCAATCGCAT
AGTATTTAA
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| Protein sequence | MTKVFINGEF VNEEDAKVSY EDRGYVFGDG IYEYIRAYDG KLFTVKEHFE RFLRSAEEIG
LDLNYTIEEL IELVRRLLKE NNVVNGGIYI QATRGAAPRN HSFPTPPVKP VIMAFTKSYD
RPYEELEQGV YAITTEDIRW LRCDIKSLNL LGNVLAKEYA VKYNAAEAIQ HRGDIVTEGA
SSNVYAIKDG VIYTHPVNNF ILNGITRRVI KWIAEDEQIP FKEEKFTVEF LKSADEVIIS
STSAEVMPIT KIDGENVQDG QVGTITRQLQ QGFEKYIQSH SI
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