Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1278 |
Symbol | |
ID | 3241724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1322341 |
End bp | 1323105 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637167927 |
Product | hypothetical protein |
Protein accession | YP_188850 |
Protein GI | 57867226 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0121566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTGGA ATTTATCGAT TATGTTGATG ATTGTTGCCT TTGGTTTTAT CGCTTCATTC GTCGATTCTG TAGTTGGTGG GGGTGGACTA ATTTCAACCC CCGCATTACT TGCAGTTGGT TTGCCACCAT CTGTTGCTTT AGGTACAAAT AAATTTGCGA GTTCTTTTAG TACGTTAACA AGTGCATTAA AATTTTTACG TTCAGGTAAA GTTGACTTGA AAATAGTAGG AAAGATGTTT CCACTAATAT TTGTTGCTTC TGGTGGTGGT GCTATCATTG CGACATACAT ACCAGCAAAT ATTTTAAAAC CGCTAATCAT TATAGCATTG TCATTAGTTC TTATTTATAC CGTCATACAA AAAGATTGGG GAAATATAAG AACATTTACC GATTTTACTT TTACAAAAGC AGTATTATTT ACATTAATAT TTATTGTTAT TGGATTTTAT GATGGGTTTT TAGGTGGTGG TACAGGCTCC TTTATGCTAT TTACACTTTT ATTATTTGGC TTTGACTTTT TAAGTGCAGC TGGTAATGCA AAGGTTTTAA ATTTTGCATC AAATTGTGGT GCGTTATTAT TTTTCATGAT TTTAGGTCAG GTCAATTATT TTTATGGTAT TATTATGGCT TCTAGCATGA TGATAGGTGC GTTGTTAGGT GCTCAATTTG CTTTGAAAAA AGGGGTAGGA TATGTAAAAG CTTTATTTTT AGTGGTTACT GCAATATTAA TTATAAAAAA TCTCTACGAT TTTATTGTGC AGTAA
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Protein sequence | MDWNLSIMLM IVAFGFIASF VDSVVGGGGL ISTPALLAVG LPPSVALGTN KFASSFSTLT SALKFLRSGK VDLKIVGKMF PLIFVASGGG AIIATYIPAN ILKPLIIIAL SLVLIYTVIQ KDWGNIRTFT DFTFTKAVLF TLIFIVIGFY DGFLGGGTGS FMLFTLLLFG FDFLSAAGNA KVLNFASNCG ALLFFMILGQ VNYFYGIIMA SSMMIGALLG AQFALKKGVG YVKALFLVVT AILIIKNLYD FIVQ
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