Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1239 |
Symbol | tig |
ID | 3241044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1274859 |
End bp | 1276160 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637167890 |
Product | trigger factor |
Protein accession | YP_188813 |
Protein GI | 57867150 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00475597 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGCAA CTTGGGAAAA AAAGGAAGGT AATGAAGGCG TTTTAACTGT TACTGTTCCT GCAGAGAAAG TAAATAAAGC ATTAGATCAA GCATTTAAAA AAGTGGTCAA ACAAATTAAT GTGCCTGGAT TCCGTAAAGG TAAAGTGCCT CGTCCAATTT TTGAGCAACG TTTTGGTGTA GAAGCACTTT ATCAAGATGC AGTGGATATT TTATTACCTG AAGCTTATGG TGAAGCAATT GAAGAAACAG AAATTAATCC AGTTGCACAA CCAGAAGTTA ATGTAACTCA AATCGAAAAA GGTAAAGATT TCATTTTTGA AGCTACAGTT ACAGTTGAAC CTGAAGTTAA ATTAGGTGAT TACAAAGGAT TAGAAATTGA AAAGCAAGAA ACTGACCTTT CTGATGAAGA ATTACAAGAA TCAATCGACC ATAGCTTAAG TCACCTTGCT GAAATGGTTG TTAAAGAAGA TGGTGCTGTT GAAAACGGTG ACACAGTAAA CATTGATTTC TCAGGTTCAG TTGATGGTGA AGAATTTGAT GGTGGACAAG CTGAAGGTTA TGACCTAGAA ATTGGTTCTG GATCATTCAT TCCTGGCTTT GAAGAACAAA TAGAAGGAAT GAAAACTGGC GATGAAAAAG ATGTAGTTGT AACATTCCCA GAAGAATACC ACGCTGAAGA ATTAGCTGGT AAAGAAGCTA CATTTAAAAC AAAAGTCAAC GAAATTAAAT TCAAAGATGT ACCAGAATTA AATGATGAGA TTGCTAACGA ATTAGATTCT GATGCTGAAA ACGTGGACGA ATATAAAGAA AATCTTCGCA AACGTTTAAG TGAACAGAAA GCAACTGAAG CTGAAAATAC TGAAAAAGAA GAAGCTATTA ATAAAGCAAC AGAAAATGCT TCAATTGATA TTCCTGAAGC AATGATTAAT ACTGAATTAG ATCGTATGAT TCAAGAATTT GGTCAAAGAA TCCAACAACA AGGCTTAGAT TTGCAAACAT ATTATCAAAT CTCTGGTCAA AACGAAGAGC AACTAAGAGA CCAAATGAAA GACGATGCAG AACAACGCGT TAAAACAAAC TTAACGTTAA CTGCGATTGC TGATGAAGAA AATATTGAAG TATCTGATGA AGATATTGAT AAAGAATTAG AAAAAATGAG CGAGCAATTT AACATTTCTG TAGAAGATAT TAAATCTACT TTAGGTAATA CAGATATTGT TAAAAATGAT GTACGCATTC AAAAAGTTAT TGATTTATTA AGAGATAATG CGAAATATGT TGAAGCTACT AAAGAAGACT AG
|
Protein sequence | MTATWEKKEG NEGVLTVTVP AEKVNKALDQ AFKKVVKQIN VPGFRKGKVP RPIFEQRFGV EALYQDAVDI LLPEAYGEAI EETEINPVAQ PEVNVTQIEK GKDFIFEATV TVEPEVKLGD YKGLEIEKQE TDLSDEELQE SIDHSLSHLA EMVVKEDGAV ENGDTVNIDF SGSVDGEEFD GGQAEGYDLE IGSGSFIPGF EEQIEGMKTG DEKDVVVTFP EEYHAEELAG KEATFKTKVN EIKFKDVPEL NDEIANELDS DAENVDEYKE NLRKRLSEQK ATEAENTEKE EAINKATENA SIDIPEAMIN TELDRMIQEF GQRIQQQGLD LQTYYQISGQ NEEQLRDQMK DDAEQRVKTN LTLTAIADEE NIEVSDEDID KELEKMSEQF NISVEDIKST LGNTDIVKND VRIQKVIDLL RDNAKYVEAT KED
|
| |