| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1234 |
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| Symbol | hemC |
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| ID | 3241039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1269281 |
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| End bp | 1270207 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637167885 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_188808 |
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| Protein GI | 57867145 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0387484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTAAAT TAATTGTTGG GTCGCGAAGA AGTAAATTAG CGCTAACACA AAGTCAACAA
TTTATAGATA AATTAAAATT TATCGATCCG TCTTTGGATA TTGAAATAAA AGAAATTGTA
ACTAAAGGCG ACAAAATTGT AGATAAACAA TTATCCAAAG TTGGAGGTAA AGGACTTTTT
GTTAAGGAAA TCCAAAATGA ATTATTTAAT AAAGAGATAG ATATGGCGAT TCATTCTCTA
AAAGATGTAC CAAGTATGAT TCCTGACGGT CTTACCTTAG GATGTATTCC TGATAGAGAA
ATTCCTTTTG ATGCCTATAT AGCAAAAAAT CATATACCAT TACAAGAATT GTCTGAGGGC
AGCATTGTAG GTACAAGTTC TTTACGTCGT GGCGCTCAAA TTTTATCAAA ATACCCACAT
TTAAAAATTA AGTGGATTCG TGGAAACATT GATACTCGAT TAAAAAAATT AGAGACTGAA
GATTATGATG CTATTATATT AGCTGCTGCT GGATTAAAAC GCATGGGTTG GTCAGATAAT
ATTGTTACGA CTTATCTTGA TCGAGATATA TTACTGCCAG CTATAGGGCA GGGTGCACTT
GGTATTGAGT GTAGGAGTGA TGACAAAGAA CTTTTAGATT TACTATCTAA AGTACACAAT
CATGATGTAG CACAATGTGT GACTGCTGAA CGTACTTTTC TATCAGAAAT GGATGGCAGT
TGTCAGGTTC CTATAGGTGG ATATGCAACA ATTGCTCAAG ATAACCAAAT TGAATTTACA
GGACTGATTA TGTCTCCAGA TGGTAAGGAA AGATATGAGC ATACAGCATT GGGTACTGAT
CCTGTAAAAT TGGGTATAGA AGTGAGTCAA GTACTTAAAA AACAAGGTGC TTATGACATA
ATTAAAAAAT TAAACGAAGC AGAATAA
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| Protein sequence | MRKLIVGSRR SKLALTQSQQ FIDKLKFIDP SLDIEIKEIV TKGDKIVDKQ LSKVGGKGLF
VKEIQNELFN KEIDMAIHSL KDVPSMIPDG LTLGCIPDRE IPFDAYIAKN HIPLQELSEG
SIVGTSSLRR GAQILSKYPH LKIKWIRGNI DTRLKKLETE DYDAIILAAA GLKRMGWSDN
IVTTYLDRDI LLPAIGQGAL GIECRSDDKE LLDLLSKVHN HDVAQCVTAE RTFLSEMDGS
CQVPIGGYAT IAQDNQIEFT GLIMSPDGKE RYEHTALGTD PVKLGIEVSQ VLKKQGAYDI
IKKLNEAE
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