Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1158 |
Symbol | |
ID | 3240957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1196340 |
End bp | 1197059 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637167811 |
Product | hypothetical protein |
Protein accession | YP_188734 |
Protein GI | 57867053 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAAT ATGAAGATAT GAGTTTAGTA TATGACAAAC TTACTCAAGA TCAACCGTAT CATTCGTGGT TTAATATTGT TGAGCATTTC TTACCTTCTG ATAGTCATGA TTTGTTAGAT ATTGGTTGCG GTACTGGCAA CTTAACACAA TTACTAACGT CACTAGGTGA AGTCACTGGT ATGGATATTA GTGTAGATAT GTTATCAATA GCTAGACAAA AAACAAATCA AGTGAAGTGG ATCGAAGGTA ATATGACTCA CTTTAATTTG AACAAAAAAT TTAATATGAT TACAATATTT TGTGATTCAC TGAATTATTT AGAAACATTA AATGACGTAA AAATGACATT CGAAAGAGTG TATCAACATT TAAATAAAAA TGGTGTTTTT ATTTTTGATG TACATACTGT TCATAAAATG AAAACATTAT TTAATAATAA AAGTTATATT GATGAATCTG ATAATGTTTT TGTAGGTTGG GATGCAATAT GTGGGGATGA ACCATTAAGT GTTTATCATG AAATGACTTT CTTTGTATCA CAGCAAAATG GATTGTATCA ACGCTTTGAC GAATCACATT ATCAAAGAAC ATATGAGGAA CAAATTTATC GAAATTTACT AAAAGATGTT GGGTATCATA GTGTTAAGAC TTTTACAGAC TTTAACATTC ACAGTCATGA AGAAGATGCC CATCGCTTGT TTTTTGTTGC TAAAAAATAA
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Protein sequence | MNQYEDMSLV YDKLTQDQPY HSWFNIVEHF LPSDSHDLLD IGCGTGNLTQ LLTSLGEVTG MDISVDMLSI ARQKTNQVKW IEGNMTHFNL NKKFNMITIF CDSLNYLETL NDVKMTFERV YQHLNKNGVF IFDVHTVHKM KTLFNNKSYI DESDNVFVGW DAICGDEPLS VYHEMTFFVS QQNGLYQRFD ESHYQRTYEE QIYRNLLKDV GYHSVKTFTD FNIHSHEEDA HRLFFVAKK
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