Gene SERP1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1109 
Symbol 
ID3240966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1150182 
End bp1151165 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content30% 
IMG OID637167762 
Productcompetence protein ComGA, putative 
Protein accessionYP_188685 
Protein GI57867062 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.140305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTTTTT TGAAAATTTT ATTTGAACAG ATTATCAATC ATGCAATTAA GCAAGAAGCA 
AGTGACATAC ACTTTATACC ATGTGAGGAA CACACTATAA TTAAGCTAAG AATTAAAGAT
GAGCTCACAA TATATGATAG ACTTTCATTT CCAATTTATA AAAAATTACT TATATACATG
AAGTTTCAAT CTGGCTTAGA TGTATCAACA CAGCATAGAG CACAAAGTGG TAGATATAGT
TATAAGATGA AGCATTTATA TTATTTAAGA ATCTCTACAT TACCTTTATC ATTAGGCAAT
GAAAGTTGTG TAATTCGTAT AGTACCTCAA TACTTCCAAA CTACACGAGA ATCATATGAA
TTTAAAGATT TTAAACACTT TATGAAAAAG AAACAAGGTC TACTTTTGTT TAGTGGACCA
ACTGGCTCTG GCAAAAGTAC TTTAATGTAC CAAATGGTCC TTTATGCACA TCAAAAATTG
AATTTAAATG TAATATCAGT TGAAGATCCA GTTGAGCAAA TACTTAATGG AATCACACAA
ATATCAGTCA ATGAAAAGGC AGGTATAAAT TATGAAAGCT CTTTCAAAGC CATTTTAAGG
TGTGATCCAG ATGTAATTTT AATTGGTGAA ATCAGAGATT CTACCGTAGC TAAATACGTG
ATTCAAGCCA GTTTAAGCGG GCATTTAGTT TTGTCGACAA TGCACGCGAA TGATTGCAAG
GGAGCACTAT TACGATTATT AGAAATGGGT ATTTCTGTCC AAGAGTTGTG CCAGGCAATC
AATTTAATTT CTAATCAAAG ATTAATCACT ACTACTACAA ATTATCGTCA ACTAGTATCG
GAATTAATGT TTCAAAGCCA AATAAATTAT TTTTTTGAAC ATAATCATTC TTTACCTAAA
AATTTCACAA AATTAGCTAC ACATTTAAAC AAAATGTCTA AAGAAGGTGT TATATGTGAA
GAAGTTGTCG ATAAATACAT TTAA
 
Protein sequence
MIFLKILFEQ IINHAIKQEA SDIHFIPCEE HTIIKLRIKD ELTIYDRLSF PIYKKLLIYM 
KFQSGLDVST QHRAQSGRYS YKMKHLYYLR ISTLPLSLGN ESCVIRIVPQ YFQTTRESYE
FKDFKHFMKK KQGLLLFSGP TGSGKSTLMY QMVLYAHQKL NLNVISVEDP VEQILNGITQ
ISVNEKAGIN YESSFKAILR CDPDVILIGE IRDSTVAKYV IQASLSGHLV LSTMHANDCK
GALLRLLEMG ISVQELCQAI NLISNQRLIT TTTNYRQLVS ELMFQSQINY FFEHNHSLPK
NFTKLATHLN KMSKEGVICE EVVDKYI