Gene SERP1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1108 
Symbol 
ID3240965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1149143 
End bp1150210 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content26% 
IMG OID637167761 
ProductcomG operon protein 2, putative 
Protein accessionYP_188684 
Protein GI57867061 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.125664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAAGT TGTCGATAAA TACATTTAAA TATAAGAGGA ATAAATATCT TACTGAAATA 
CAATCAATAG ACTTACTACA GAGATTACAA CAGCTTTTAA GTCACGGATT CACTTTATAT
CAAAGTTTTA AATTTTTAAA CTCCTATTTT AAATATAAAG AGCGAACAAT AAATAAAAAG
ATTATCCAAC ATCTACAAAA CGGTGCTACA TGTTATGATA TTTTAAAAAT AATAGGGTAT
CCAGAATTAG TTCTTCTTCA AATAAAATTT GCTGAAAACT ACGGCAACAT TGAGGAGGCT
CTCGTTGATA CTGTTCAATA TATGAAAAGA AATCTGAAAG CTAAAAAACG ACTCATCAAA
ACCTTACAAT ATCCTGTTGC ATTAATTTCT ATCTTCTTAT TCATATTAAC CATTTTAAAT
ATAACTGTCA TACCTCAATT TCAACAACTT TATGAGACTA TGAATGTTAA ATTATCAACA
TTTCAAAATC TACTAACTCT TATTATTACC CGTCTTCCCA AACTAACTTT CATTTTTATC
TTTATTAGTG GTATAGCATT TTTTATCACT TATAAATTCT ACTATTATCT ACCAATTGAG
AAAAAGTTAA AATCTATTTT AAAAATCCCA ATGATTAATA CGTATTATAA AATATATAGA
ACTTATCAAC TTTCCAATCA ACTTTCTTTA TTTTACAGAA ATGGTACAAG TCTTCAACAA
ATTGTCCGTA TATATCGTAA TGAGCAAGAT AACGATTTTC TTAAATTTCT GGGTGATTAT
CTTTTTAAAG AAGCTAATAA AGGGCTCCCG TTACCTGTTA TATTAATGAA TTTAAAATGT
TTTCAAAATG ATTTGATTAA ATTCATAGAA CAAGGAGAGA AAAATGGGAA ATTAGATATA
GAATTAAAGT TATACAGTCA AATGCTATTA CAGCAATTTG AAGAAAAAGT GTTAAAACAA
ACAAAATTTA TACAACCTAT CATCTTCTTT ATCTTGGGAA TTTTTATTGT ATCTTTATAC
TTAGTCATTA TGCTTCCTAT GTTTGAACTT ATGCAAACAA TAAAATAA
 
Protein sequence
MKKLSINTFK YKRNKYLTEI QSIDLLQRLQ QLLSHGFTLY QSFKFLNSYF KYKERTINKK 
IIQHLQNGAT CYDILKIIGY PELVLLQIKF AENYGNIEEA LVDTVQYMKR NLKAKKRLIK
TLQYPVALIS IFLFILTILN ITVIPQFQQL YETMNVKLST FQNLLTLIIT RLPKLTFIFI
FISGIAFFIT YKFYYYLPIE KKLKSILKIP MINTYYKIYR TYQLSNQLSL FYRNGTSLQQ
IVRIYRNEQD NDFLKFLGDY LFKEANKGLP LPVILMNLKC FQNDLIKFIE QGEKNGKLDI
ELKLYSQMLL QQFEEKVLKQ TKFIQPIIFF ILGIFIVSLY LVIMLPMFEL MQTIK