Gene SERP1089 details

Gene Information

• Locus tag: SERP1089
• Symbol: argD
• ID: 3242103
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 1133703
• End bp: 1134830
• Gene Length: 1128 bp
• Protein Length: 375 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637167743
• Product: acetylornithine aminotransferase
• Protein accession: YP_188666
• Protein GI: 57867027
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4992] Ornithine/acetylornithine aminotransferase
• TIGRFAM ID: [TIGR00707] acetylornithine and succinylornithine aminotransferases

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.820491
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTATC TTTTTAATAA TTACAAGCGT GACAATATAG AGTTTGTTGA TGCTAATCAA 
AATGAATTAA TTGATAAAGA TAATAATGTC TACCTAGATT TTTCGTCAGG TATAGGTGTG 
ACAAATCTGG GTTTTAATAT GGAAATTTAC CAAGCAGTTT ATAATCAACT GAATTTAATA 
TGGCATTCAC CCAATTTATA CCTAAGTAGT ATCCAAGAGG AAGTGGCTCA AAAATTAATT 
GGTCAACGAG ATTATTTAGC TTTCTTTTGT AATAGCGGAA CAGAAGCGAA TGAGGCAGCT 
ATCAAACTCG CACGTAAAGC TACTGGTAAG TCGGAAATTA TTGCTTTTAA AAAGTCTTTT 
CACGGCAGAA CGTACGGCGC AATGTCTGCA ACAGGACAGA AGAAAATTAC AGATCAATTT 
GGTCCGGTTG TTCCTGGATT CAAATTTGCT ATTTTTAATG ATTTTAATTC ATTTAAATCA 
TTAACTTCAA ATAATACTGC TGCTGTAATT ATAGAAATAA TTCAAGGTGA ATCAGGAGTA 
CTACCTGCTG ATTCTTTATT TATGAAGCAA TTAAATGAGT ATTGTAAACA AAAAGATATC 
CTTATAATTG TAGACGAGGT TCAAACGGGC ATAGGTAGAA CCGGTAAGTT ATATGCTCAT 
GAACATTATC AATTGTCTCC AGATATCATC ACATTAGCTA AAGGATTAGG TAATGGCCTT 
CCTATTGGAG CAATGTTAGG CAAAAAAAAT TTAGGTCATG CATTTGGCTA CGGTTCTCAT 
GGTACAACAT TCGGTGGAAA TAGATTATCA TTGGCTGCTG CAAACCAAAC GCTTTCTATC 
ATTAATGATG CTGATTTGCT GAATGATGTT CAATCAAAGG GGCAATTTCT TATTGAAAAC 
TTAAGAAAAA GTTTAGTAAA TAAAAGAAAT GTAATTGAAG TACGTGGTGT AGGTTTAATG 
GTAGGAATAG AGGTCACTAA TGATCCTAGT CAAGTAGTGC GAGAAGCTAA ACGTATGGGG 
TTAATCATTT TAACAGCTGG TAAAAATGTG ATTAGGTTAT TACCGCCATT GACCATCACT 
AAAAAACAAT TAGAAAAAGG TATAGAAATA TTAACTGAAA TCATTTGA 

 

Protein sequence

MSYLFNNYKR DNIEFVDANQ NELIDKDNNV YLDFSSGIGV TNLGFNMEIY QAVYNQLNLI 
WHSPNLYLSS IQEEVAQKLI GQRDYLAFFC NSGTEANEAA IKLARKATGK SEIIAFKKSF 
HGRTYGAMSA TGQKKITDQF GPVVPGFKFA IFNDFNSFKS LTSNNTAAVI IEIIQGESGV 
LPADSLFMKQ LNEYCKQKDI LIIVDEVQTG IGRTGKLYAH EHYQLSPDII TLAKGLGNGL 
PIGAMLGKKN LGHAFGYGSH GTTFGGNRLS LAAANQTLSI INDADLLNDV QSKGQFLIEN 
LRKSLVNKRN VIEVRGVGLM VGIEVTNDPS QVVREAKRMG LIILTAGKNV IRLLPPLTIT 
KKQLEKGIEI LTEII