| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1060 |
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| Symbol | xerD |
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| ID | 3240699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1105244 |
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| End bp | 1106131 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637167714 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_188637 |
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| Protein GI | 57866964 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC
[TIGR02225] tyrosine recombinase XerD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.17947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATACTA TCATTGAAGA ATATTTAAAT TTCATTCAAA TTGAAAAAGG ATTAAGTAAC
AATACTATAG GAGCGTATCG AAGAGATTTA AAAAAATATA AAGATTATCT TGAAGATAAC
AAGATTTCAC ATATCGATTT TATTGATAGA CAAATTATCC AAGAGTGTCT TGGACACCTT
ATAGATATGG GGCAATCTTC AAAATCTCTC GCAAGGTTTA TTTCTACAAT AAGAAGCTTT
CATCAGTTTG CATTACGCGA AAAATATGCT GCTAAAGACC CAACTGTTTT AATTGAAACA
CCCAAATATG AAAAGAAATT ACCAGATGTG CTTGAAATAG ACGAAGTAAT AGCATTACTG
GAAACGCCTG ATTTAACTAA GAATAATGGA TATCGTGATC GTACGATGTT GGAGCTTTTA
TACGCCACAG GTATGCGTGT AACTGAAATT ATTCAATTAG ATGTTGAAGA CGTAAACTTA
ATGATGGGAT TTGTAAGAGT TTTCGGGAAA GGGAATAAGG AAAGAATCGT TCCCTTAGGA
GATACCGTCA TCGAATATTT AACTACATAT ATTGAAACCG TAAGACCTCA ATTACTCAAA
CAAACCACAA CTCAAGCGCT ATTTCTTAAC ATGCATGGAA AGTCTTTATC AAGACAAGGC
ATTTGGAAAA TCATTAAACA ATATGGTTTG AAAGCTAATA TCAATAAAAC GCTTACACCA
CATACATTAC GGCATTCATT TGCAACACAT CTCTTAGAAA ATGGTGCTGA TTTAAGAGCC
GTACAAGAAA TGTTAGGTCA CTCTGATATT TCTACAACTC AACTTTATAC ACATGTATCT
AAATCACAAA TTAGAAAAAT GTATACGCAG TTTCATCCAA GAGCTTAG
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| Protein sequence | MNTIIEEYLN FIQIEKGLSN NTIGAYRRDL KKYKDYLEDN KISHIDFIDR QIIQECLGHL
IDMGQSSKSL ARFISTIRSF HQFALREKYA AKDPTVLIET PKYEKKLPDV LEIDEVIALL
ETPDLTKNNG YRDRTMLELL YATGMRVTEI IQLDVEDVNL MMGFVRVFGK GNKERIVPLG
DTVIEYLTTY IETVRPQLLK QTTTQALFLN MHGKSLSRQG IWKIIKQYGL KANINKTLTP
HTLRHSFATH LLENGADLRA VQEMLGHSDI STTQLYTHVS KSQIRKMYTQ FHPRA
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