| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1038 |
|---|
| Symbol | |
|---|
| ID | 3240718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1083802 |
|---|
| End bp | 1084761 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637167692 |
|---|
| Product | polyprenyl synthetase |
|---|
| Protein accession | YP_188615 |
|---|
| Protein GI | 57866983 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR02748] heptaprenyl diphosphate synthase component II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAAGT TAAACATTAA CAACGAAATA AAGAAAGTAG AAAAGCGACT TGAAGAAGCA
ATTATAAGTT CTGATCAAAC ATTACAAGAA GCCTCATTCC ATTTACTATC TTCAGGGGGA
AAAAGAGTTA GACCCGCTTT TGTTATTTTA AGTGGTCAAT TTGGCTCTAA CAACAAACCT
TCAGAAGACA CGTATCGTGT AGCAGTAGCT TTAGAACTAA TTCACATGGC TACCTTAGTC
CACGATGATG TGATAGATAA AAGTGATAAA CGTAGAGGCC GACTCACTAT TTCAAAAAAA
TGGGACCAAA GTACAGCTAT TTTAACAGGA AATTTCTTAC TTGCTATGGG GCTCAAGCAT
TTATCTGAAA TCAGTGATAC TCGTGTCCAT TCGACCATTT CTAAATCAAT TGTTGATGTG
TGTAGAGGAG AACTATTCCA ATTTCAAGAT CAATTTAATA GCAATCAAAC AATTACTAAT
TACTTACGTC GTATCAACCG TAAAACAGCA CTTCTTATTC AACTGTCTAC ACAAGTTGGT
GCGATTACTT CCAATGCGTC AAATGACGTT ATTCGTAAAT TAAAAATGAT CGGACATTAT
ATAGGTATGA GTTTCCAAAT AATAGATGAT GTGCTAGATT TTACTAGTTC TGAAAAGAAA
CTTGGTAAGC CGGTTGGTAG TGACCTTATG AATGGTCATA TTACATTACC TGTACTATTA
GAAATGCGAA AAAATAAGAC TTTTAAAGAT AAAATTTCAC AACTTAATCC TGACAGTCCT
CAACATGCCT TTGAAACTTG TATAACAATA ATTAGACAGT CCGAAAGCAT AGAACAATCA
AAACAAATAA GTGAAAAGTA TTTAAATAAA GCAATCAATT TAATCGATGA ATTAGAGGAT
GGTCCTAATA AAGAACTATT TAGAAAGCTT ATTAAAAAAA TGGGAAGTCG AAATAAGTAA
|
|---|
| Protein sequence | MAKLNINNEI KKVEKRLEEA IISSDQTLQE ASFHLLSSGG KRVRPAFVIL SGQFGSNNKP
SEDTYRVAVA LELIHMATLV HDDVIDKSDK RRGRLTISKK WDQSTAILTG NFLLAMGLKH
LSEISDTRVH STISKSIVDV CRGELFQFQD QFNSNQTITN YLRRINRKTA LLIQLSTQVG
AITSNASNDV IRKLKMIGHY IGMSFQIIDD VLDFTSSEKK LGKPVGSDLM NGHITLPVLL
EMRKNKTFKD KISQLNPDSP QHAFETCITI IRQSESIEQS KQISEKYLNK AINLIDELED
GPNKELFRKL IKKMGSRNK
|
|---|
| |