| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1025 |
|---|
| Symbol | |
|---|
| ID | 3240690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1069448 |
|---|
| End bp | 1072156 |
|---|
| Gene Length | 2709 bp |
|---|
| Protein Length | 902 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637167679 |
|---|
| Product | DNA polymerase III, epsilon subunit/ATP-dependent helicase DinG |
|---|
| Protein accession | YP_188602 |
|---|
| Protein GI | 57866955 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1199] Rad3-related DNA helicases
[COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01407] DnaQ family exonuclease/DinG family helicase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATAG CAACATTTGC AGTTGTTGAT TTAGAAACAA CTGGAAATCA ACTGGATTAT
GATGAAATCA TTCAAATTGG TATTACGTTT GTGCGTCAGA ATCAAGTAAT TGATACATAC
CATTCAATGA TACGTACCGA TTTAGAAATT CCACCGTTTA TCCAAGCCTT AACTTCTATA
GAAGAAGAAA TGTTAGTACA GGCACCTTAT TTTAATGAGG TCGCAGATGA CATTTATCAA
CTTATCAAAG ACTGTGTTTT TGTTGCACAT AATATCTCAT TTGATCTTAA TTTTATAAAA
AAAGCTTTTG AAAAATGTAA TATTCAATTT AAACCTAAAA GAGTAATGGA TACTTTAGAA
TTGTTTAAAA TCGCATTCCC TACAGACAAA AGCTACCAGT TAAGTGCATT GGCTGAATCT
CATCATATAC CATTAAATAA TGCACATAGA GCAGATGAAG ATGCAACAAC AACTGCTAAA
TTGATGATTA AAGCTTTTGA GAAGTTCGAG CAATTGCATT TAGATACACA AAAACAACTG
TACTATTTAA GTAAAAATCT CAAGTATGAT CTTTATCATA TTTTGTTTGA AATGGTTAGA
AATTATCAAA CTAAACCGCC TAACAACCAA TTTGAACAAT TTGAACAAAT TATTTACCGT
AAACAAATTG ATTTAAAAAA ACCGGCTGTC AATTTTGATG GTACCTTAAA AGATTTATAT
AAAAATGTCA CTCAATCATT AAATCTTACA TATCGGCCAC AACAGTTATA CCTAGCCGAA
ATTATACTTG ATCAGTTGAT GCATAGTGAT AAGGCAATGA TTGAAGCTCC TTTGGGTAGT
GGAAAGTCTC TTGCTTACCT GCTTGCAGCA ACAATGTATA ATATTGAGAC CGGTCGTCAT
GTAATGATTT CAACAAATAC AAAATTATTA CAAAGTCAGC TATTAGAGAA AGACATACCA
TTACTCAATG ATGTTTTAGA TTTTAAAATT AACGCGTCAT TAATCAAAAG TAAAAATGAT
TATATATCTC TTGGTCTTAT CAGCCAAATT CTTAAAGACG ATACAAATAA TTATGAAGTA
AGTATTCTTA AAATGCAGTT ACTTATTTGG ATAACTGAAA CAAATACTGG GGACATACAG
GAATTAAATC TTAAAGGTGG ACAAAAAATG TATGTTGACC AAAAAATTGA AACATACGTT
CCAGTTCGTC ATGATATCCA TTATTATAAT TATATAAAAA GAAATGCTCA AAACATACAA
ATTGGTATCA CTAATCATGC GCACTTAATT CATTCAGACA GTGAAAACAC TATATATCAA
CTATTTGATG ATTGCATCAT CGATGAAGCA CATAGATTGC CTGACTATGC GCTAAATCAA
GTTACTAATG ATTTAAATTA TTCAGATGTT AAATATCAAT TAGGACTTAT TGGCAAAAAT
GAAAATGAAA AACTACTTAA AGCAGTAGAC AAACTTGAGC AACAACGTAT TTTAGAGAAA
CTAGATATTG CACCTATAGA CGTTTTTGGA CTGAAAATAA ATATCAATGA GTTACATGAT
TTAAATGAGC AACTATTCAC TACAATTTAT AATATTATTC AAACATCAGA CGTTTATGAT
GATGACATTC ATAAGTATCA TTACGTTTAT GACTTTGAAA CGGGTGAGAT TTTAAAAGAT
TTACGTGCAA TCATAGATAA ATTAAATAAA ACGATAGAAA TTTTTAACGG AATGAATCAC
AAAACAATCA AGTCTGTACG GAAACAATTA TTATACTTAC ATGACAAATT TAAACTTATC
GAACAAAGTA TAAAAGATCA TCATACAAGC TTTATTTCAA TTAAAAATTT AGCACAAAAA
TCAACAATCC GACTCTTAGT CAAGGATTAT GATGTTAAAG ATATCTTGAC GAAACAAGTA
CTCGAAAAAT TTAAGTCTCT TACATTTATA TCTGGCACAT TAACTTTCAA TCACTCATTT
AAAGCATTTC AAAATTGGTT TAATGAAGAT ATAGACTTTA ATACATTTGA AATTTCAACA
CCTTTAACAT CATCCAACCA TACAAATGTT TTTGTGCCCA ATGATGTTGA AACGTACAAT
TATAAAAATT TAGACGATTA TGTAGCTTCA ATTGTAGACT ATATTGTTGA ATACATCACA
GTGACACAGT CGAAATGTCT TGTCTTATTT ACAAGCTATA AAATGATGCA TATGGTTCAA
GATTTGTTAA ATGAATTACC TGAGTTAGAA GATTATGTCA TTTTAACCCA ACAACAAAAC
CAAAATTATA AAATTGTTCA ACAATTTAAT AACTTTGATA AATCTATACT TCTTGGAACA
TCAACATTTT TTGAAGGTTT TGATTTTCAA GCCAATGGCC TTAAATGTGT AATGATAGCT
AAATTACCAT TTATGAATAA ACATAATATT AAATACTGGC TTATGGATTC TGAATTCACA
TCAACTTTTA AAGATTATGT ATTACCTGAT GCTGTAACAA GGTTTAGACA AGGTCTTGGA
CGTCTTATTC GACACGAAGA CGACAAAGGA CTTATTGTGT CATTTGATGA TCGACTAGTA
AATAGCACAT ATAAAAGCTT TTTTGCTCAA TCACTAGAAC ATTTTAAACA ACGAAAAGGT
AATATTAAAC AGTTTAATAA ATTACTGAAT CAAATACAGA GGTCTATCGA TAATGAGAGT
AAAAGCTAA
|
|---|
| Protein sequence | MGIATFAVVD LETTGNQLDY DEIIQIGITF VRQNQVIDTY HSMIRTDLEI PPFIQALTSI
EEEMLVQAPY FNEVADDIYQ LIKDCVFVAH NISFDLNFIK KAFEKCNIQF KPKRVMDTLE
LFKIAFPTDK SYQLSALAES HHIPLNNAHR ADEDATTTAK LMIKAFEKFE QLHLDTQKQL
YYLSKNLKYD LYHILFEMVR NYQTKPPNNQ FEQFEQIIYR KQIDLKKPAV NFDGTLKDLY
KNVTQSLNLT YRPQQLYLAE IILDQLMHSD KAMIEAPLGS GKSLAYLLAA TMYNIETGRH
VMISTNTKLL QSQLLEKDIP LLNDVLDFKI NASLIKSKND YISLGLISQI LKDDTNNYEV
SILKMQLLIW ITETNTGDIQ ELNLKGGQKM YVDQKIETYV PVRHDIHYYN YIKRNAQNIQ
IGITNHAHLI HSDSENTIYQ LFDDCIIDEA HRLPDYALNQ VTNDLNYSDV KYQLGLIGKN
ENEKLLKAVD KLEQQRILEK LDIAPIDVFG LKININELHD LNEQLFTTIY NIIQTSDVYD
DDIHKYHYVY DFETGEILKD LRAIIDKLNK TIEIFNGMNH KTIKSVRKQL LYLHDKFKLI
EQSIKDHHTS FISIKNLAQK STIRLLVKDY DVKDILTKQV LEKFKSLTFI SGTLTFNHSF
KAFQNWFNED IDFNTFEIST PLTSSNHTNV FVPNDVETYN YKNLDDYVAS IVDYIVEYIT
VTQSKCLVLF TSYKMMHMVQ DLLNELPELE DYVILTQQQN QNYKIVQQFN NFDKSILLGT
STFFEGFDFQ ANGLKCVMIA KLPFMNKHNI KYWLMDSEFT STFKDYVLPD AVTRFRQGLG
RLIRHEDDKG LIVSFDDRLV NSTYKSFFAQ SLEHFKQRKG NIKQFNKLLN QIQRSIDNES
KS
|
|---|
| |