Gene SERP0942 details

Gene Information

• Locus tag: SERP0942
• Symbol: trpB
• ID: 3242085
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 958460
• End bp: 959668
• Gene Length: 1209 bp
• Protein Length: 402 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637167597
• Product: tryptophan synthase subunit beta
• Protein accession: YP_188520
• Protein GI: 57866893
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0133] Tryptophan synthase beta chain
• TIGRFAM ID: [TIGR00263] tryptophan synthase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATTC AAACAGAAGT AGATGAATTG GGCTTTTTCG GTGAATATGG TGGCCAATAT 
GTACCTGAAA CATTGATGCC AGCTATTATT GAACTTAAAA AAGCATATGA GGACGCGAAA 
TCAGATACTC ACTTCAAGAA AGAATTTAAT TATTATTTAA GTGAATATGT TGGTAGAGAA 
ACGCCTTTAA CATTTGCTGA ATCATACACA AAATTGTTAG GTGGTGCCAA AATATATCTT 
AAAAGAGAAG ACTTAAATCA CACTGGTGCT CATAAAATTA ATAACGCGAT AGGACAGGCA 
CTATTAGCTA AAAGGATGGG GAAAACTAAA TTAGTAGCCG AAACAGGTGC TGGTCAACAT 
GGTGTAGCAA GTGCCACCAT CGCTGCTTTA TTCGATATGG ATCTTATTGT TTTCATGGGA 
AGTGAAGATA TCAAACGTCA ACAACTTAAC GTATTTAGAA TGGAATTGCT AGGAGCTAAA 
GTAGTGTCTG TGTCAGATGG GCAAGGAACA CTATCAGATG CTGTAAATAA AGCTTTGCAA 
TATTGGGTGA ATCATGTCGA GGATACACAT TATTTATTAG GCTCAGCGTT GGGACCTGAT 
CCGTTTCCAA CTATGGTCAG AGATTTTCAG AGTGTGATTG GTAATGAAAT TAAAAGCCAA 
ATTTTAAGTA AAGAAGGACG ACTTCCAGAT GCGTTAGTCG CGTGTGTTGG TGGAGGATCC 
AATTCAATAG GTACGTTCTA TCCATTTATA CAAGATGATG TTAAATTATA TGGGGTAGAA 
GCTGCGGGAA AAGGAAGTCA TACGCATAAT CATGCTTTAG CTATAGGGAA AGGTAAACCA 
GGTGTATTAC ATGGTTCCAA AATGTACCTT ATTCAAAATG ATGATGGACA AATTGAATTG 
GCACACTCTA TATCAGCGGG ACTAGATTAT CCAGGTATTG GACCTGAACA TTCGTATTAT 
AATGATATTG GTCGTGTATC ATATGTAAGT GCTACAGATA ATGAAGCTAT GGAAGCACTT 
ATAACATTCT CAAAAGTTGA AGGTATCATT CCAGCAATTG AAAGTGCACA TGCATTGAGT 
TATGTTGAAA AATTAGCGCC AAATATGGAT GAAAAAGAAA TTATTGTTGT GACTATTTCA 
GGTCGTGGAG ATAAAGATAT GGAAACAATT AAACAATACA AAGAAAACGG TGGTGAACAA 
AATGAGTAA 

 

Protein sequence

MKIQTEVDEL GFFGEYGGQY VPETLMPAII ELKKAYEDAK SDTHFKKEFN YYLSEYVGRE 
TPLTFAESYT KLLGGAKIYL KREDLNHTGA HKINNAIGQA LLAKRMGKTK LVAETGAGQH 
GVASATIAAL FDMDLIVFMG SEDIKRQQLN VFRMELLGAK VVSVSDGQGT LSDAVNKALQ 
YWVNHVEDTH YLLGSALGPD PFPTMVRDFQ SVIGNEIKSQ ILSKEGRLPD ALVACVGGGS 
NSIGTFYPFI QDDVKLYGVE AAGKGSHTHN HALAIGKGKP GVLHGSKMYL IQNDDGQIEL 
AHSISAGLDY PGIGPEHSYY NDIGRVSYVS ATDNEAMEAL ITFSKVEGII PAIESAHALS 
YVEKLAPNMD EKEIIVVTIS GRGDKDMETI KQYKENGGEQ NE