| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0935 |
|---|
| Symbol | |
|---|
| ID | 3242070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 951003 |
|---|
| End bp | 952265 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637167590 |
|---|
| Product | ImpB/MucB/SamB family protein |
|---|
| Protein accession | YP_188513 |
|---|
| Protein GI | 57866878 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGATT ACAATTTATT AGAAGATAGG GATGTACTCT GCATAGACCA AAAAAGTTTT
TTTGCGAGTG TATCATGTAT GGAAAAAGGA TTGGACCCAT TAACAACTAA ACTAGCAGTT
GTAGCAGATA CGAAAAGGCA AGGTTCGGTC GTTCTAGCAG CAACTCCAAA GTTAAAAGAA
TTAGGTATTA AAACGGGATC AAGACTTTTT GAGATACCAC ATCGTAATGA CATTTATATT
ATTAATCCAA GTATGAGAAA GTATTTAAAT GTATCTGTTG CAATTTCAAA GATTGCACTG
CGGTACGTTC CACCTGAAGA TTTACATCAG TATAGTATTG ATGAATTTTT CATGGATGTA
ACGGATAGTT ACCATAGATT TAATTCAACA GTTTTTGCTT TTTGTAAAAG ATTTCAAAAT
GAAATATTAG AAGAAACAGG TATTCACTGT ACCATTGGAA TAGGCTCGAA TATGCTATTG
AGCAAGGTTG CAATGGATAT TGAAGCTAAG CATTCGGAAA ACGGTATAGC TGAATGGCGT
TATCAAGATG TACCTGAAAA ATTATGGCCA ATTCAACCAC TTAGAGATTT TTGGGGGATT
AATAAGCGTA CAGAAAAGAA ATTGAATAAA AGAGGAATAT TTACAATAGG AGATTTAGCA
AAGTATCCAT ATCATTATTT AAAAAGAGAT TTTGGAGTTT TAGGTATAGA TATGCATCTA
CATGCAAACG GTATTGATCA AAGTAAAGTA AGAGAAAAAT ATAAAGTAAC AAATCCTTCA
ATATGTAAAA GTCAGATTCT AATGCGAGAT TATCAATTTG AAGAATCCAA AGTTGTCATG
CAAGAATTGA TAGAAGATGT AGCAAGTCGT TTAAGAGCAG AAAAGAAGCT TGCTCGAACA
ATTCATTTTT CTTTCGGTTA TGCTGAAGGT GGTGGCATAC ATAAGCAATA TACTTTGGAG
GATCCTACAA ATTTAGAAAG AGATATATTC AAAGTCATTA ATTATTTTGC AAATCGTCTG
TGTGACAAAA AAGCATTGTA TAGAACGTTA AGTGTATCGT TAACTCAGTT TATTAAAGAA
AGCGATCGAC AACTCAACTT ATTCATTGAT GAATATGAAC GTAAGAAAGA TGTAAAACTT
GCTAAAACCA TTGATCACTT ACATTTAAAA TATGGAAAAG GAATTGTGTC AAAAGCGACT
TCATACACCG AAGCTGGTAC AAAGCATGGT CGATTAGGAC TAATGGCTGG TCATAAAATG
TAG
|
|---|
| Protein sequence | MYDYNLLEDR DVLCIDQKSF FASVSCMEKG LDPLTTKLAV VADTKRQGSV VLAATPKLKE
LGIKTGSRLF EIPHRNDIYI INPSMRKYLN VSVAISKIAL RYVPPEDLHQ YSIDEFFMDV
TDSYHRFNST VFAFCKRFQN EILEETGIHC TIGIGSNMLL SKVAMDIEAK HSENGIAEWR
YQDVPEKLWP IQPLRDFWGI NKRTEKKLNK RGIFTIGDLA KYPYHYLKRD FGVLGIDMHL
HANGIDQSKV REKYKVTNPS ICKSQILMRD YQFEESKVVM QELIEDVASR LRAEKKLART
IHFSFGYAEG GGIHKQYTLE DPTNLERDIF KVINYFANRL CDKKALYRTL SVSLTQFIKE
SDRQLNLFID EYERKKDVKL AKTIDHLHLK YGKGIVSKAT SYTEAGTKHG RLGLMAGHKM
|
|---|
| |