Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0883 |
Symbol | |
ID | 3242635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 896005 |
End bp | 897030 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637167540 |
Product | hypothetical protein |
Protein accession | YP_188463 |
Protein GI | 57866784 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATTTCAT TTGAAAATGA TTACTTAGAA GGTGCACATG AAAAAGTTTT AAATCGATTA GTAGAGACAA ATCGAATACA AGCTGCTGGA TATGGCTTTG ATGACTTTTC GGCACAAGCT GCAGATAAAA TTAGACAACG TATTGACTGT CCAGATGCTA CCATTCGGTT TTTAGTAGGT GGTACGCAAA CCAATCAAGT AGTTATTAAC TCAATGCTTG ATAGTTATGA AGGTGTTATA TCCGCTGATA CAGGACATGT GGCAGTCCAT GAAGGTGGTG CGATAGAATT CAGTGGACAT AAAGTTCTAA CCATCCCCTC CCAAGAAGGT AAAATTACTG CTCAAGACGT TGAGAATTAT ATAGAAACTT TTGAAAGTGA TTTTAAAAAA GAGCACATGG TGTATCCAGG GATGGTTTAT ATTTCACATC CAACCGAATA CGGAACTTTA TACACGAAAG AGGAATTACA ATCTTTATCT AGAGTTTGCC GTAGACATCA GATTCCACTA TTTATGGATG GTGCACGTTT AGGCTATGGT CTTATGAGTA ATCAAACTAA TGTAACTATC GAAGATGTTG CAAAATACTG TGATGTGTTT TACATAGGAG GTACTAAGAT TGGAGCACTT TGTGGTGAAG CAATCGTCTT CACTAAACAA AATGAACCTA AAAACTTCAC TACAATTATA AAACATCATG GTGCTTTATT AGCAAAAGGC CGTCTAACTG GTGTTCAATT TTTAGAATTA TTCACTGATG ATTTATATTT TGATATAAGT CGACATGCTA TTAAAATGGC TGAAAAGGTA AAAAAAGGAT TTATAGATAA AGGATATCAA GTCTATTTTG ATTCACCAAC CAATCAACAA TTTTTTATTT TAAGCAACGA TAAAATTGAA GAACTAAAAC AAAAGGTAAA ATTCGCAGTT TGGGAGAAAT ACGATAATCA ACATCGTGTA GTTCGCTTCG CAACAAGTTG GGCCACTACT GAAGAAAATG TTAATCAACT ACTTGAACTA ATATAA
|
Protein sequence | MISFENDYLE GAHEKVLNRL VETNRIQAAG YGFDDFSAQA ADKIRQRIDC PDATIRFLVG GTQTNQVVIN SMLDSYEGVI SADTGHVAVH EGGAIEFSGH KVLTIPSQEG KITAQDVENY IETFESDFKK EHMVYPGMVY ISHPTEYGTL YTKEELQSLS RVCRRHQIPL FMDGARLGYG LMSNQTNVTI EDVAKYCDVF YIGGTKIGAL CGEAIVFTKQ NEPKNFTTII KHHGALLAKG RLTGVQFLEL FTDDLYFDIS RHAIKMAEKV KKGFIDKGYQ VYFDSPTNQQ FFILSNDKIE ELKQKVKFAV WEKYDNQHRV VRFATSWATT EENVNQLLEL I
|
| |