Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0604 |
Symbol | |
ID | 3241138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 596485 |
End bp | 596994 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637167265 |
Product | hypothetical protein |
Protein accession | YP_188191 |
Protein GI | 57866584 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.167538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTTTAG GATTAGCATT GGTTCCGTCA AAGTCATTTC AAGATGAGGT GAATGCTTAT CGCAAGCGAT ATGACAATCA TTATGCTCAA ATAATGCCTC ATATCACGAT TAAACCTCAA TTTGAAATCG ATGATCATGA TTTTAATTTA ATTAAAAATG AAGTGAAAAA TCGAATTTCT AGTATTAAAC CAGTAGAAGT ACATGCTACA AAGGCATCTA ATTTCGCTCC AATCAGTAAT GTTATATACT TCAAAGTTGC TAAAACAGAG TCATTAGATC AATTATTTAA TCAATTTAAT ACAGAAGATT TTTACGGTAC AGCTGAACAT CCTTTTGTAC CACATTTTAC AATTGCCCAA GGTCTAACAA GTCAAGAATT TGAAGATATA TATGGTCAAG TAAAATTAGC AGGGGTAGAC CATAGAGAAA TAATTGAAGA ACTATCGTTA CTTCAATATA GTGAAGAAGA GGACAAATGG ACTATTATTG AAACTTTTAC ATTAGGATAA
|
Protein sequence | MILGLALVPS KSFQDEVNAY RKRYDNHYAQ IMPHITIKPQ FEIDDHDFNL IKNEVKNRIS SIKPVEVHAT KASNFAPISN VIYFKVAKTE SLDQLFNQFN TEDFYGTAEH PFVPHFTIAQ GLTSQEFEDI YGQVKLAGVD HREIIEELSL LQYSEEEDKW TIIETFTLG
|
| |