Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0395 |
Symbol | |
ID | 3241329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 396498 |
End bp | 397373 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637167061 |
Product | hypothetical protein |
Protein accession | YP_187988 |
Protein GI | 57866329 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.460041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTGA ATTCAAAAGT TAAAGGTATT ATTGCTATAT TGATTTCAGC TGTGGGTTTT AGTTTTATGT CAGTCTTTTT TAGATTGGCC GGTGATTTAC CAGTCTTTCA AAAATCTCTA GCTAGAAATT TTGTAGCCAT GTTTATACCA TTATTTTTTA TTTATAAATA TAGGCAACCT ATGTTTGGAA AATTAAGTAG TCAACCCCTA CTCATCTCAC GTTCAACACT TGGGTTAATT GGTGTCTTAC TTAATATCTA CGCAATTGAT CACATGGTAT TAAGTGATGC TGATACATTA ATGAAATTAA ATCCTTTTTG GACAATTGTT CTTAGTTTAA TTTTTTTACA TGAAAAGGTA CGAAAATATC AAATCACGGC GATGATTATT GCTATAATAG GGATGCTATT AATTGTTAAA CCAGAATTTT CATCATCAGT TATTCCTTCA ATAGCAGGAT TACTATCCGG TATTTTTGCA GCTTCTGCCT ACACATGTGT TAGAGCACTC AGCACTCGTG AAAAACCTTA TACGATAGTG TTTTATTTTT CATTATTCTC AGTTGTAGTT CTTATACCTT TTTCAATATT TACTTATACA CCTATGACAA CAATTCAAAT TCTTTTCTTA CTCGGCGCTG GATTATCAGC AGCTGTAGGA CAAATTGGTA TAACATTGGC TTATAGTTTT GCTCCAGCAA AAGATATCTC CATCTTCACA TATGCGTCTA TAATATTTAC TGCATTATTT GGATTTATTC TGTTTGGAGA ATCACCTGAT ATGTTTGCAA CAGTAGGATA TATTGTCATT ATCGGAGCAA GTTACTATAT GTTTGATAAA GCAAGACGTG AAACAACTAT AAATCAAAAT AATTAA
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Protein sequence | MILNSKVKGI IAILISAVGF SFMSVFFRLA GDLPVFQKSL ARNFVAMFIP LFFIYKYRQP MFGKLSSQPL LISRSTLGLI GVLLNIYAID HMVLSDADTL MKLNPFWTIV LSLIFLHEKV RKYQITAMII AIIGMLLIVK PEFSSSVIPS IAGLLSGIFA ASAYTCVRAL STREKPYTIV FYFSLFSVVV LIPFSIFTYT PMTTIQILFL LGAGLSAAVG QIGITLAYSF APAKDISIFT YASIIFTALF GFILFGESPD MFATVGYIVI IGASYYMFDK ARRETTINQN N
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