| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0349 |
|---|
| Symbol | |
|---|
| ID | 3241331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 349758 |
|---|
| End bp | 351131 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637167018 |
|---|
| Product | deoxyribodipyrimidine photolyase, putative |
|---|
| Protein accession | YP_187945 |
|---|
| Protein GI | 57866289 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.723156 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATAG GTGTCATATT AAATAGAGTT TTTAGGCTAA ATAATAATCC ATTATTTGAT
TATATATATA GTAATAAAGA ATCTATAAAT CATTGTTATT TTATTATTCC AACTGAAGAG
TTTGAAGAAG AAGCAAAAAA GAAAGCACAA TACTATTATG GGTCCATACA GAAGTTTATG
TATGAACTAC AACGATATGA TATAGAACCC TTTTTGATGT CTTATGATAA ATTAATAGAC
TTTTGTAAAA AACAAGCTAT AGACAAAGTT GTTGTTGCAG GTGATATTAT GAGTTATCAT
CACGAAGAAT ATGACATTTT ACATCAAAGG AAACGATTTA AACAAGCTAA TATTCAAGTA
ATATCATTAA GAGCAAATCA TTATTTTAAC CCCCGCAAAA CACATAATAA ACAAGGGGAA
CCATATAAAG TATTTACCAG TTTTTATAGA AAATGGCGTC CTTACTTAAT GATTAGAGAT
GAATATGACT ATCATTTAGA AGATATTTCA AAGGTTGTAG TGAAATCTCA ACATAAAATT
AAAGAAGATT ATCATTCATA TGGTATAAGT GAACGTGATG TTCAAAATCG TTGGTCTGAA
TTTTTATCTC AAGATATCGA AAATTATAAA GAAAACAGGG AATACTTGCC TGAAGTATTA
ACAAGCCAAC TAAGTATTTA CTTAGCTTAT GGAATGATAG ATATTATACA AGTTTTCAAC
GATTTACTTC AAAATTATGA TAAAAATGAA CAAAATTACG AAACTTTTAT ACGTGAATTG
ATTTTTAGAG AGTTTTATTA TGTATTAATG ACCAATTATC CCGAAACAGC TCATGTTGCT
TTTAAAGAAA AATACCAACA ATTGAAATGG TCTTATAATG AAGAGAATTT TAAACTGTGG
AAAGATGGGA ATACTGGTTT TCCAATTATT GATGCAGCAA TGGAGGAACT TAAAACAACT
GGATTTATGC ATAATCGCAT GAGAATGGTA GTTTCTCAAT TTTTAACTAA AGATTTGTTT
ATTGACTGGA TTTGGGGTGA GTCATTTTTC AAACAAAAAT TAATAGATTA TGATGCAGCT
TCAAATGTTC ACGGATGGCA GTGGTCAGCT TCTACTGGAA CAGATGCTGT ACCATACTTT
AGAATGTTTA ATCCTATAAG ACAAAGCGAG CGTTTTGATA ATAATGCACG ATATATAAAA
ACTTACATTC CAAGATTAAA TCAGGTAGAT GCTAAGTATT TACACGATAC TCATAAATTC
GAGCAACAAA TAAAGGGGCA AGGTGTTGAA ATAGGTAAAG ACTATCCTAA ACAAATGATT
GATCACAAAG AAAGTAGACA ACGTGTAATG TCAGAATTCA AAGCATTAGA TTAA
|
|---|
| Protein sequence | MAIGVILNRV FRLNNNPLFD YIYSNKESIN HCYFIIPTEE FEEEAKKKAQ YYYGSIQKFM
YELQRYDIEP FLMSYDKLID FCKKQAIDKV VVAGDIMSYH HEEYDILHQR KRFKQANIQV
ISLRANHYFN PRKTHNKQGE PYKVFTSFYR KWRPYLMIRD EYDYHLEDIS KVVVKSQHKI
KEDYHSYGIS ERDVQNRWSE FLSQDIENYK ENREYLPEVL TSQLSIYLAY GMIDIIQVFN
DLLQNYDKNE QNYETFIREL IFREFYYVLM TNYPETAHVA FKEKYQQLKW SYNEENFKLW
KDGNTGFPII DAAMEELKTT GFMHNRMRMV VSQFLTKDLF IDWIWGESFF KQKLIDYDAA
SNVHGWQWSA STGTDAVPYF RMFNPIRQSE RFDNNARYIK TYIPRLNQVD AKYLHDTHKF
EQQIKGQGVE IGKDYPKQMI DHKESRQRVM SEFKALD
|
|---|
| |