| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0320 |
|---|
| Symbol | |
|---|
| ID | 3241291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 324467 |
|---|
| End bp | 326641 |
|---|
| Gene Length | 2175 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 637166989 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_187916 |
|---|
| Protein GI | 57866236 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.804033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATT CTTGTTTGCA TATACTTTCA AAAAAAGAAT ATACGGCAAC ACGATGTCAA
GACGGCATTT TATTATTTTG GCCTATCGAA GGGAGTATGC ACTTTCAACA ATTTATGAAA
GAAAGGATAC TCTCAGATGA GTTATATATT GTGAATAATA TGGATGTGTT TAGTATCAGT
GACAATGGCA TCACACTAGA AGTATATATT TCTAGTGATT GGTTTACAGA GTTAGGCTAT
TCTTTTTTTA ATTACCATTA TATTTCGGAT TTAATACAAT CTAAGAAAGA AATTAAAGAA
CTAGTTGCTC AACTTACGTT GAATTTTTTA GATAATGATG TGGATAAAGA GCAAGATATT
ATCAATAAAA TTGTTCATAT TCTTGCTAAT GAGGCTATTA TTGACAAAAA AATTGCTGAA
GACCAATATA TGTATGATTA TTATGGTGAG TTAAAGGATG AATTGAATTA TATATATAAT
CACATCGAAG AAAGACTTAC TCTAAAAGAT ATTTCCAATA AATTATATGT TTCTAAGTCC
AACCTTTCTA CGCAGTTTCA TTTGTTATTA GGTATGGGAT TTAAAAAATA TATAGATACA
CTTAAAATTA GTAAATCTAT AGAGATGCTA CTTACGACAA CTAAAACGAT AAGCCAAATT
AGTGAAACGT TAGGATTTAG TAATGTATCT ACATATTCTA GACAATTCAA AAATTATTTA
AGTGTAACGC CCAATGCATA TCGTGCAATG AAAAAATATG ATAAGTACAA TGGATGTTCT
GATGATGATG TTTCAGAACA CTTAAAATCA TGTGTACAAT CATTAATATG TTCTAAAATG
CCAACGAATG AGTTAGATAA TTATGATGAA ATTGTTATTG ACCAATATCC AATTTCTAAT
GTTTCAACGT TTTATTCTGT CGTTCAAATT AATTCAATTG ATGAAATTAA AATGTTGTTT
TTGCAAGGTA TTCATAAAAA AATAGGGTAT GAAGGTTCAA ATATTATTTT TTGTATTATG
CCTAACTTAT GCCAATATAA GAATTTGTTC TCTCAAGAAG AGATGAATGA TATCATTAAA
ATTATTATTG AATATCGCTT GCACGTCGCA TTTAGCATCG ATAAAATCGA GCAAATATAT
GAACTTAATC AACTTTTTAC ATATCAATAT GAAAACTTAA AAATTATGAA TAAATGTTCT
GTTTCAGATT ACAATGTGCA ATTTATATTT AATTTGAACG AAAAAAGTAT TCGAGAAATT
TATCGTAATA TCTTGAAGAT ACAAAACATC GAATTGGAAT ATAAAATAGG TTTAGATATT
AGTTGCATGT TTAATGACAC TGCACAATTT AAATCATTAG CTTCGCAAAT AAAGCGTTTA
AAATTTGACT ATCTTTATAT TGATAATGCT AGATTAAAGT CACCCTATTT ACTTGATAAT
GAGGAAGGTT TATTACTCAA AAATATTCTA CAATTTAAGC ATTTAATAGA TGATTTAAAG
CAGTTTGATT TTAGTAGTGA AAATTTAATT TTTCTAAATT TATATAATCA TCAATTACTG
AATAATAATG AAATTGATTT AAGTAATAGC GCTCCATTAC TATTTAAAAC GATTTCAAAA
CTAAAAAAAC ATTTTAAAGG CTACGGATTA AATGTATTTT CAAATCCTAA AGTCTTTAAC
GCTGTACATT TATTTGATGA GAATGGGTTT AAAACAACGT TTGGACTGAT TTTTAATCAT
TTGAGTTGGA TGACTAATCA AAACCAAATT GAACAACGAT TCTATAATAT TATTGAAAAT
GCTGATCAAT ATTATCTCTA CTTATATGAT TGGCGTGTGA TTGAAAGTGA ATCTAATGAG
AGCGACTTTA AAGACGTTGA TATATGGATT AACTTTGAAG ATGAAGCGTT AATAGATGAA
TATATTTGTG TGATTGCTAA AGTTGATGAT GAAGGTGGCA ATATTAATCA TATGATTTCT
CAAAACTTAC GTCACAAATA TGTTTGGTCT ACACCGTTCT TGATGAGAGT TGAGGAGAAC
TTTAGACCAT ACATGCACAT TATGGAACAT GACTTTAAAA AGGGCCCATT GAAAATCAGA
ATGAAATATA ATGCAGTATA TTTAGTTGAA ATATATAAAA AAGATAAAAT AAATAAAAGG
CGTAGCACAA CTTAA
|
|---|
| Protein sequence | MANSCLHILS KKEYTATRCQ DGILLFWPIE GSMHFQQFMK ERILSDELYI VNNMDVFSIS
DNGITLEVYI SSDWFTELGY SFFNYHYISD LIQSKKEIKE LVAQLTLNFL DNDVDKEQDI
INKIVHILAN EAIIDKKIAE DQYMYDYYGE LKDELNYIYN HIEERLTLKD ISNKLYVSKS
NLSTQFHLLL GMGFKKYIDT LKISKSIEML LTTTKTISQI SETLGFSNVS TYSRQFKNYL
SVTPNAYRAM KKYDKYNGCS DDDVSEHLKS CVQSLICSKM PTNELDNYDE IVIDQYPISN
VSTFYSVVQI NSIDEIKMLF LQGIHKKIGY EGSNIIFCIM PNLCQYKNLF SQEEMNDIIK
IIIEYRLHVA FSIDKIEQIY ELNQLFTYQY ENLKIMNKCS VSDYNVQFIF NLNEKSIREI
YRNILKIQNI ELEYKIGLDI SCMFNDTAQF KSLASQIKRL KFDYLYIDNA RLKSPYLLDN
EEGLLLKNIL QFKHLIDDLK QFDFSSENLI FLNLYNHQLL NNNEIDLSNS APLLFKTISK
LKKHFKGYGL NVFSNPKVFN AVHLFDENGF KTTFGLIFNH LSWMTNQNQI EQRFYNIIEN
ADQYYLYLYD WRVIESESNE SDFKDVDIWI NFEDEALIDE YICVIAKVDD EGGNINHMIS
QNLRHKYVWS TPFLMRVEEN FRPYMHIMEH DFKKGPLKIR MKYNAVYLVE IYKKDKINKR
RSTT
|
|---|
| |