| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0242 |
|---|
| Symbol | |
|---|
| ID | 3242306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 249056 |
|---|
| End bp | 250387 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637166911 |
|---|
| Product | pyridine nucleotide-disulfide oxidoreductase family protein |
|---|
| Protein accession | YP_187838 |
|---|
| Protein GI | 57866191 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.235438 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATT ATGATTTGAT TATTATTGGT TTTGGAAAAG CAGGTAAAAC ATTAGCGGCA
CATGCTGCTA GTCACGGACA AAAGGTTGCA GTGGTAGAAC AATCAACAAA GATGTATGGC
GGTACATGCA TTAATATCGG ATGTATACCG ACTAAAACAT TAATTCATGA TGGTATTGAA
GGTAGTTCAT TCAAAGAGGC TATTACTAGA AAAAAAGAAG TCGTACAGGC ATTGAATAAC
AAGAACTATC AAGGCTTAAA TTCAAAGGAC AATATAGATG TTCTAAATTA TAAAGCTAAT
TTTATTTCTA ACGAGGTAAT AGAACTACAA GATAATAATG GAACAATTCA AGAAACAATT
ACAGCAGATA AGATAGTAAT CAACACTGGT TCACGTGCAA ATATCCCAGA TATCAAAGGG
ATAGATACAG CTCAAAATAT ATATGATTCT ACTGGATTAC TAAATATTGA CTATCAACCT
CAAGAACTTG TTATTATTGG TGGTGGTTAT ATCGCTCTCG AATTCGCTTC AATGTTTGCA
AATTTTGGAA CACATGTAAC AATTCTTGAG CGTGGTGATG CTATCATGAC AAATGAAGAT
CAAGACATTG CAAATCTTAT TGTCAAAGAT TTACAAGATA AAGGTGTGAC TATAAACACT
AATACTAGTA CTATTGCATT TTCAAACAAT AAAGATCAAA CTATCATACA CACAAATCAT
GGAGAAATAT CAGCTGATAC TGTGCTCTTA GCCACAGGTC GTAAGCCAAA TACAAATCAC
TTAGGTCTTG AAAATACAGA TGTAAAAATC GGAAAACAAG GTGAAGTAAT TGTAAATACA
CATTTGCAAA GTACAGTGAA ACACATATAC GCTGCAGGTG ATGTTAAAGG TGGATTGCAA
TTTACGTATA TTTCACTCGA TGATTATAGA ATCATTAAAT CACATCTATT TGGTGATGGT
TCTAGAACAA CTGAAAATCG TGGTGCAATA CCTTATACGG TCTTTATTGA TCCTCCTCTA
TCTAGAGTAG GACTAATTGC AAGTGAGGCG AAATTACAAG GATACGATAT TCTAGAAAAT
AAAGTCTTTG TCAGTAACAT ACCCCGTCAC AAAATCAATA ATGATTCCAG AGGTTTATTT
AAAGCAGTAA TTAATAAAGA TACAAAAGAA ATTTTAGGAG CGTCATTATA TGGCAAAGAA
TCAGAAGAAC TGATTAGCTT AATCAAACTT GCTATAGATC AACATATTCC TTACACAGTA
TTAAGAGATA ATATATACAC ACATCCGACA ATGACCGAAT CCTTTAATGA CTTGTTTTTA
GAACCACTTT GA
|
|---|
| Protein sequence | MKNYDLIIIG FGKAGKTLAA HAASHGQKVA VVEQSTKMYG GTCINIGCIP TKTLIHDGIE
GSSFKEAITR KKEVVQALNN KNYQGLNSKD NIDVLNYKAN FISNEVIELQ DNNGTIQETI
TADKIVINTG SRANIPDIKG IDTAQNIYDS TGLLNIDYQP QELVIIGGGY IALEFASMFA
NFGTHVTILE RGDAIMTNED QDIANLIVKD LQDKGVTINT NTSTIAFSNN KDQTIIHTNH
GEISADTVLL ATGRKPNTNH LGLENTDVKI GKQGEVIVNT HLQSTVKHIY AAGDVKGGLQ
FTYISLDDYR IIKSHLFGDG SRTTENRGAI PYTVFIDPPL SRVGLIASEA KLQGYDILEN
KVFVSNIPRH KINNDSRGLF KAVINKDTKE ILGASLYGKE SEELISLIKL AIDQHIPYTV
LRDNIYTHPT MTESFNDLFL EPL
|
|---|
| |